Type | Description |
---|---|
Definition | SH3 domain binding glutamate rich protein |
Date | Results | Publications |
---|---|---|
2016-05-09 12:11:00 | RNA-seq evidence of biallelic expression of SH3BGR and 10 neighboring genes in at least one primary human tissue tested indicates that the expression of SH3BGR is uncoupled from the control of the maternally inherited 5mCpG imprints at the WRB differentially methylated region (DMR) in disomic controls or trisomy (Down syndrome) individuals. | 27100087 |
2010-09-15 22:06:00 | Observational study and genome-wide association study of gene-disease association. (HuGE Navigator) | 20532202 |
Type | IDs |
---|---|
Synonymous | 21-GARP |
Gene |
UniProtKB-ID:
SH3BG_HUMAN,
C9JJT2_HUMAN
UniprotKB:
P55822,
C9JJT2
UniParc:
UPI00003B0CF9,
UPI000198C850,
UPI00001B03C6
EMBL:
AF121897,
AF121781,
CH471079,
BC006371,
AL163279,
BM474020,
AL163280,
X93498,
KF510561
Ensembl:
ENSG00000185437
KO:
hsa:6450
|
Nucleutide sequences |
EMBL-CDS:
EAX09639.1,
EAX09640.1,
EAX09638.1,
AAD12067.1,
AAH06371.1,
CAB57259.1,
CAB90445.1,
CAB90456.1
Ensembl_TRS:
ENST00000380631,
ENST00000380637,
ENST00000333634,
ENST00000380634,
ENST00000458295
|
Protein sequencees |
Ensembl_PRO:
ENSP00000370005,
ENSP00000370008,
ENSP00000332513,
ENSP00000370011,
ENSP00000404980
RefSeq:
NP_001304670.1,
NP_001304669.2,
NP_031367.2,
NP_001304671.1,
NP_001001713.1
|
Others |
UniRef100:
UniRef100_P55822,
UniRef100_C9JJT2
UniRef90:
UniRef90_C9JJT2,
UniRef90_P55822
UniRef50:
UniRef50_C9JJT2,
UniRef50_P55822
UniGene:
Hs.473847
CCDS:
CCDS33560.1
|
{{proteinIndex+1}} | mRNA | Protein | UniprotKB | Description | ||||
---|---|---|---|---|---|---|---|---|
Refseq |
{{protein.nucleotideVersion}}
Ensembl: {{protein.nucleotideEnsembl}} |
{{protein.proteinVersion}}
Ensembl: {{protein.proteinEnsembl}} |
{{uniprot}} , |
Definition: {{{protein.definition}}}Transcript Veriant:{{protein.transcriptVeriant}} Status: {{protein.status}} |
||||
Location | {{protein.contigId}} ( {{protein.positionStart}}..{{protein.positionEnd}} , {{protein.orientation}} ) | |||||||
Conserved domain | Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
{{conservedDomain.comments == '' || conservedDomain.comments == null ? "-" : conservedDomain.comments }} |
Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
{{conservedDomain.comments == '' || conservedDomain.comments == null ? "-" : conservedDomain.comments }} |
暂无数据
Pubmed编号 | 文献信息 | 发表日期 | 相关基因 |
---|---|---|---|
29955039 |
Cell Death Dis Marisa Cappella , Alessandra Perfetti , Beatrice Cardinali , Jose Manuel Garcia-Manteiga , Matteo Carrara , Claudia Provenzano , Paola Fuschi , Rosanna Cardani , Laura Valentina Renna , Giovanni Meola , Germana Falcone , Fabio Martelli |
2018-06-28 | - |
28611215 |
Genome-wide CRISPR screen identifies HNRNPL as a prostate cancer dependency regulating RNA splicing. Proc. Natl. Acad. Sci. U.S.A. Teng Fei , Yiwen Chen , Tengfei Xiao , Wei Li , Laura Cato , Peng Zhang , Maura B Cotter , Michaela Bowden , Rosina T Lis , Shuang G Zhao , Qiu Wu , Felix Y Feng , Massimo Loda , Housheng Hansen He , X Shirley Liu , Myles Brown |
2017-06-27 | - |
28514442 |
Architecture of the human interactome defines protein communities and disease networks. Nature Edward L Huttlin , Raphael J Bruckner , Joao A Paulo , Joe R Cannon , Lily Ting , Kurt Baltier , Greg Colby , Fana Gebreab , Melanie P Gygi , Hannah Parzen , John Szpyt , Stanley Tam , Gabriela Zarraga , Laura Pontano-Vaites , Sharan Swarup , Anne E White , Devin K Schweppe , Ramin Rad , Brian K Erickson , Robert A Obar , K G Guruharsha , Kejie Li , Spyros Artavanis-Tsakonas , Steven P Gygi , J Wade Harper |
2017-05-25 | - |
27100087 |
Trisomy 21 Alters DNA Methylation in Parent-of-Origin-Dependent and -Independent Manners. PLoS ONE Antônio Francisco Alves da Silva , Filipe Brum Machado , Ãrika Cristina Pavarino , Joice Matos Biselli-Périco , Bruna Lancia Zampieri , Ronaldo da Silva Francisco Junior , Pedro Thyago Mozer Rodrigues , Douglas Terra Machado , CÃntia Barros Santos-Rebouças , Maria Gomes Fernandes , Susana Marina Chuva de Sousa Lopes , Ãlvaro Fabricio Lopes Rios , Enrique Medina-Acosta |
2016-01-01 | - |
20532202 |
PLoS Genet Jussi Naukkarinen , Ida Surakka , Kirsi H Pietiläinen , Aila Rissanen , Veikko Salomaa , Samuli Ripatti , Hannele Yki-Järvinen , Cornelia M van Duijn , H-Erich Wichmann , Jaakko Kaprio , Marja-Riitta Taskinen , Leena Peltonen , ENGAGE Consortium |
2010-06-03 | - |
19460752 |
J Biol Chem Man Lung Yeung , Laurent Houzet , Venkat S R K Yedavalli , Kuan-Teh Jeang |
2009-07-17 | - |
18654987 |
Proteomics Subhash Thalappilly , Muhtadi Suliman , Odile Gayet , Philippe Soubeyran , Aurélie Hermant , Patrick Lecine , Juan L Iovanna , Nelson J Dusetti |
2008-08-01 |
TOM1L1,
SF3B4,
UBE4B,
CCNO,
VAV3,
CCT2,
HSPH1,
SF3A3,
CHKA,
CFAP36,
PIK3AP1,
C2orf73,
DNAJC21,
CRKL,
AP2B1,
MEGF6,
FKBP4,
SNW1,
POGZ,
DCUN1D4,
DNMBP,
FNTA,
CD2AP,
SH3BP4,
FUCA1,
CIZ1,
ARIH1,
BOD1L1,
GAPVD1,
SERBP1,
GAPDHS,
HBP1,
NFU1,
CRCP,
GRB2,
GRN,
NR4A1,
HNRNPF,
HOXC11,
HSPA5,
HSP90AB1,
MSL1,
NCKAP5,
LAMA5,
LMNA,
NOTCH2,
ITSN2,
NCKIPSD,
TRMO,
SRRT,
CHMP3,
WBP11,
C9orf78,
PFDN5,
PLSCR1,
MPHOSPH8,
YTHDF1,
PPM1B,
ARHGAP17,
MRGBP,
PHF10,
DNAJA4,
BIN3,
PSMA1,
BIRC6,
RAD23A,
RBBP6,
PLEKHA1,
SH3BGR,
ITSN1,
MARCH7,
SRP72,
SRPK2,
BRDT,
ST13,
STAC,
TARBP2,
TCP1,
TCP11,
BUB1B,
NR2C2,
CCT3,
TRIP6,
TTC1,
TTN,
VAV2,
VCP,
PRR14,
IPO4,
VCPIP1,
GKAP1,
CEP78,
LTBP4,
STK24,
ZBTB37,
USP38,
CBL,
EIF4G3,
ASAP2
|
16780588 |
BMC Genomics Yu-Hui Hu , Hans-Jörg Warnatz , Dominique Vanhecke , Florian Wagner , Andrea Fiebitz , Sabine Thamm , Pascal Kahlem , Hans Lehrach , Marie-Laure Yaspo , Michal Janitz |
2006-01-01 |
DSCR3,
B3GALT5,
CCT8,
WDR4,
HSF2BP,
CXADR,
ETS2,
RRP1B,
CLDN14,
C2CD2,
CLDN17,
DNMT3L,
HLCS,
HMGN1,
KRTAP6-1,
IFNGR2,
KCNA5,
KCNE1,
KCNJ6,
MX1,
MEMO1,
PCP4,
PDE9A,
PFKL,
PKNOX1,
UBASH3A,
BRWD1,
PCBP3,
LRRC3DN,
PPIA,
C21orf59,
AGPAT3,
MAP3K7CL,
BACH1,
SH3BGR,
TMPRSS3,
UBE2G2,
TMEM50B,
RUNX1-IT1,
CHAF1B,
LINC01547,
PDXK,
RRP1,
CBS,
MCM3AP,
RSPH1,
CLDN8,
PAXBP1,
ABCG1,
CRYZL1,
KCNE2
|
15489334 |
Genome Res. Daniela S Gerhard , Lukas Wagner , Elise A Feingold , Carolyn M Shenmen , Lynette H Grouse , Greg Schuler , Steven L Klein , Susan Old , Rebekah Rasooly , Peter Good , Mark Guyer , Allison M Peck , Jeffery G Derge , David Lipman , Francis S Collins , Wonhee Jang , Steven Sherry , Mike Feolo , Leonie Misquitta , Eduardo Lee , Kirill Rotmistrovsky , Susan F Greenhut , Carl F Schaefer , Kenneth Buetow , Tom I Bonner , David Haussler , Jim Kent , Mark Kiekhaus , Terry Furey , Michael Brent , Christa Prange , Kirsten Schreiber , Nicole Shapiro , Narayan K Bhat , Ralph F Hopkins , Florence Hsie , Tom Driscoll , M Bento Soares , Tom L Casavant , Todd E Scheetz , Michael J Brown-stein , Ted B Usdin , Shiraki Toshiyuki , Piero Carninci , Yulan Piao , Dawood B Dudekula , Minoru S H Ko , Koichi Kawakami , Yutaka Suzuki , Sumio Sugano , C E Gruber , M R Smith , Blake Simmons , Troy Moore , Richard Waterman , Stephen L Johnson , Yijun Ruan , Chia Lin Wei , S Mathavan , Preethi H Gunaratne , Jiaqian Wu , Angela M Garcia , Stephen W Hulyk , Edwin Fuh , Ye Yuan , Anna Sneed , Carla Kowis , Anne Hodgson , Donna M Muzny , John McPherson , Richard A Gibbs , Jessica Fahey , Erin Helton , Mark Ketteman , Anuradha Madan , Stephanie Rodrigues , Amy Sanchez , Michelle Whiting , Anup Madari , Alice C Young , Keith D Wetherby , Steven J Granite , Peggy N Kwong , Charles P Brinkley , Russell L Pearson , Gerard G Bouffard , Robert W Blakesly , Eric D Green , Mark C Dickson , Alex C Rodriguez , Jane Grimwood , Jeremy Schmutz , Richard M Myers , Yaron S N Butterfield , Malachi Griffith , Obi L Griffith , Martin I Krzywinski , Nancy Liao , Ryan Morin , Ryan Morrin , Diana Palmquist , Anca S Petrescu , Ursula Skalska , Duane E Smailus , Jeff M Stott , Angelique Schnerch , Jacqueline E Schein , Steven J M Jones , Robert A Holt , Agnes Baross , Marco A Marra , Sandra Clifton , Kathryn A Makowski , Stephanie Bosak , Joel Malek , MGC Project Team |
2004-10-01 |
Ldlrap1,
Dnajc3,
Rnaset2a,
Btnl1,
Isg15,
Cyp3a41b,
Ly6c2,
Ccl21b,
Eif3j2,
Mup18,
Lrrc19,
Rcc1,
1700047I17Rik2,
Pcsk9,
Adat3,
Tdrd7,
Sco2,
Gpr153,
Pafah2,
Gm44504,
H6pd,
Adprhl2,
Gpn2,
Rusc2,
Stx12,
Ppp1r8,
Smpdl3b,
Fam46b,
Bsdc1,
Slc44a1,
Zfand2a,
Rubcn,
Kifc1,
Pifo,
C030017K20Rik,
Cbarp,
Rpl5,
Micalcl,
Atg14,
Lrrc8c,
Noc4l,
Nsun5,
Psph,
Trrap,
Mapre3,
Ube3c,
Tbc1d14,
Hscb,
Tyw1,
Emilin1,
Rab28,
Pot1a,
Parp11,
Tada3,
Tra2a,
Brk1,
Fbxl14,
Phrf1,
Plekha1,
Gm21975,
Ric8a,
Mob2,
Prkd2,
Ccp110,
Vrk3,
Grwd1,
Nlrp6,
Trim68,
Psip1,
Spred3,
Faap24,
Ints4,
Rrp8,
Unc45a,
Igflr1,
Sf3b3,
D8Ertd738e,
Usb1,
Champ1,
Smim19,
Exoc8,
Gadd45gip1,
Phkb,
Dohh,
Fam192a,
Enkd1,
Taf5l,
Zdhhc7,
Snapc2,
Ak6,
Gpat4,
Dcun1d2,
Ankrd10,
Cog4,
Hinfp,
Lars2,
Xylb,
Imp3,
Cmtm7
|
14767758 |
Hum. Genet. Claudia Sandri , Raffaella Di Lisi , Anne Picard , Carla Argentini , Elisa Calabria , Kristene Myklak , Paolo Scartezzini , Stefano Schiaffino |
2004-04-01 |
SH3BGR
|
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