LOC542407 - octopine synthase binding factor 3-BMKCloudï½ç¾è¿å®¢äº

542407 LOC542407

基因描述

Type	Description
Definition	octopine synthase binding factor 3

名称对应

Type	IDs
Synonymous	GRMZM2G125243, obf3.2
Gene	UniProtKB-ID: A0A1D6G9R7_MAIZE, C0PCQ0_MAIZE UniprotKB: A0A1D6G9R7, C0PCQ0 UniParc: UPI0004DEA6AE, UPI000194B373 EMBL: CM000784, BT066069 EnsemblGenome: Zm00001d012553 KO: zma:542407
Nucleutide sequences	EMBL-CDS: AQK99851.1, ACN31945.1, AQK99854.1 Gene_ORFName: ZEAMMB73_Zm00001d012553, ZEAMMB73_Zm00001d012553 EnsemblGenome_TRS: Zm00001d012553_T002, Zm00001d012553_T004
Protein sequencees	EnsemblGenome_PRO: Zm00001d012553_P002, Zm00001d012553_P004 RefSeq: XP_008655434.1, XP_008655435.1, XP_008655436.1, NP_001105448.2, XP_020397921.1, XP_020397920.1, XP_035817466.1
Others	UniRef100: UniRef100_C0PCQ0, UniRef100_A0A1D6G9R7 UniRef90: UniRef90_C0PCQ0 UniRef50: UniRef50_A0A1R3JZJ3 UniGene: Zm.128

全选

{{proteinIndex+1}}	mRNA	Protein	UniprotKB	Description
Refseq	{{protein.nucleotideVersion}} Ensembl: {{protein.nucleotideEnsembl}}	{{protein.proteinVersion}} Ensembl: {{protein.proteinEnsembl}}	{{uniprot}}	Definition: {{{protein.definition}}} Transcript Veriant:{{protein.transcriptVeriant}} Status: {{protein.status}}
Location	( {{protein.positionStart}}..{{protein.positionEnd}} )
Conserved domain	Region: {{conservedDomain.region == '' \|\| conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' \|\| conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' \|\| conservedDomain.family == null ? "-": conservedDomain.family}} CDD:	{{conservedDomain.comments == '' \|\| conservedDomain.comments == null ? "-" : conservedDomain.comments }}	Region: {{conservedDomain.region == '' \|\| conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' \|\| conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' \|\| conservedDomain.family == null ? "-": conservedDomain.family}} CDD:	{{conservedDomain.comments == '' \|\| conservedDomain.comments == null ? "-" : conservedDomain.comments }}

mRNA

Protein

UniprotKB

Description

Refseq

Ensembl: {{protein.nucleotideEnsembl}}

Ensembl: {{protein.proteinEnsembl}}

Definition: {{{protein.definition}}}

Transcript Veriant:{{protein.transcriptVeriant}}

Status: {{protein.status}}

Location

( {{protein.positionStart}}..{{protein.positionEnd}} )

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Pubmed编号	文献信息	发表日期	相关基因
19936069	Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs. PLoS Genet Carol Soderlund , Anne Descour , Dave Kudrna , Matthew Bomhoff , Lomax Boyd , Jennifer Currie , Angelina Angelova , Kristi Collura , Marina Wissotski , Elizabeth Ashley , Darren Morrow , John Fernandes , Virginia Walbot , Yeisoo Yu	2009-11-01	-
15020742	Anchoring 9,371 maize expressed sequence tagged unigenes to the bacterial artificial chromosome contig map by two-dimensional overgo hybridization. Plant Physiol. Jack Gardiner , Steven Schroeder , Mary L Polacco , Hector Sanchez-Villeda , Zhiwei Fang , Michele Morgante , Tim Landewe , Kevin Fengler , Francisco Useche , Michael Hanafey , Scott Tingey , Hugh Chou , Rod Wing , Carol Soderlund , Edward H Coe	2004-04-01	esr1, Pti1b, IDP370, meg3, cl51309_1, cl1510_1a, acpt1, cyp8, nad1, kin1, umc1811, fcr2, kin2, AY105746, AY109516, AY109668, AY109722, AY111178, AY111541, AY111834, LOC100126914, PCO062666, AY106606, AY106635, CL16923_1, gpm12, gpm2, gpm4, gpm3, AY107489, IDP2492, IDP527, IDP158, betl10, crr5, IDP1684, IDP2466, IDP462, IDP41, IDP22, LOC100126971, lhcb4, AY108650, AY107012, IDP1989, IDP688, IDP478, IDP155, a2, nad2, hsbp1, umc2332, cl37957_1, pco095461, LOC100191402, LOC100191528, LOC100191548, csu657(atpd), LOC100191642, LOC100191715, si707014a06, LOC100191947, LOC100191987, asn3, SnRK2.2, LOC100192672, LOC100192701, LOC100192715, LOC100193070, pco117551, LOC100193471, TIDP3612, ERD6, LOC100193772, LOC100193825, pco093521a, LOC100193933, pco071536, LOC100194050, LOC100194211, LOC100194361, gpm105, gpm556, LOC100216599, TIDP2845, pco123576, umc2313, cl28396_1a, TIDP3174, LOC100217160, LOC100217211, IDP27, pco096794a, pco136400, LOC100272327, LOC100272740, LOC100272871, LOC100272966, pco100749b
8374617	Isolation of a maize bZIP protein subfamily: candidates for the ocs-element transcription factor. Plant J. R C Foley , C Grossman , J G Ellis , D J Llewellyn , E S Dennis , W J Peacock , K B Singh	1993-05-01	obf3.2, gpm638

Pubmed编号

文献信息

发表日期

相关基因

19936069

Sequencing, mapping, and analysis of 27,455 maize full-length cDNAs.

PLoS Genet Carol Soderlund , Anne Descour , Dave Kudrna , Matthew Bomhoff , Lomax Boyd , Jennifer Currie , Angelina Angelova , Kristi Collura , Marina Wissotski , Elizabeth Ashley , Darren Morrow , John Fernandes , Virginia Walbot , Yeisoo Yu

2009-11-01

15020742

Anchoring 9,371 maize expressed sequence tagged unigenes to the bacterial artificial chromosome contig map by two-dimensional overgo hybridization.

Plant Physiol. Jack Gardiner , Steven Schroeder , Mary L Polacco , Hector Sanchez-Villeda , Zhiwei Fang , Michele Morgante , Tim Landewe , Kevin Fengler , Francisco Useche , Michael Hanafey , Scott Tingey , Hugh Chou , Rod Wing , Carol Soderlund , Edward H Coe

2004-04-01

esr1, Pti1b, IDP370, meg3, cl51309_1, cl1510_1a, acpt1, cyp8, nad1, kin1, umc1811, fcr2, kin2, AY105746, AY109516, AY109668, AY109722, AY111178, AY111541, AY111834, LOC100126914, PCO062666, AY106606, AY106635, CL16923_1, gpm12, gpm2, gpm4, gpm3, AY107489, IDP2492, IDP527, IDP158, betl10, crr5, IDP1684, IDP2466, IDP462, IDP41, IDP22, LOC100126971, lhcb4, AY108650, AY107012, IDP1989, IDP688, IDP478, IDP155, a2, nad2, hsbp1, umc2332, cl37957_1, pco095461, LOC100191402, LOC100191528, LOC100191548, csu657(atpd), LOC100191642, LOC100191715, si707014a06, LOC100191947, LOC100191987, asn3, SnRK2.2, LOC100192672, LOC100192701, LOC100192715, LOC100193070, pco117551, LOC100193471, TIDP3612, ERD6, LOC100193772, LOC100193825, pco093521a, LOC100193933, pco071536, LOC100194050, LOC100194211, LOC100194361, gpm105, gpm556, LOC100216599, TIDP2845, pco123576, umc2313, cl28396_1a, TIDP3174, LOC100217160, LOC100217211, IDP27, pco096794a, pco136400, LOC100272327, LOC100272740, LOC100272871, LOC100272966, pco100749b

8374617

Isolation of a maize bZIP protein subfamily: candidates for the ocs-element transcription factor.

Plant J. R C Foley , C Grossman , J G Ellis , D J Llewellyn , E S Dennis , W J Peacock , K B Singh

1993-05-01

obf3.2, gpm638

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