High resolution annotation of zebrafish transcriptome using long-read sequencing.

Genome Res.     German Nudelman , Antonio Frasca , Brandon Kent , Kirsten C Sadler , Stuart C Sealfon , Martin J Walsh , Elena Zaslavsky

trappc11 is required for protein glycosylation in zebrafish and humans.

Mol. Biol. Cell     Charles DeRossi , Ana Vacaru , Ruhina Rafiq , Ayca Cinaroglu , Dru Imrie , Shikha Nayar , Anastasia Baryshnikova , Miroslav P Milev , Daniela Stanga , Dhara Kadakia , Ningguo Gao , Jaime Chu , Hudson H Freeze , Mark A Lehrman , Michael Sacher , Kirsten C Sadler

RFX transcription factors are essential for hearing in mice.

Nat Commun     Ran Elkon , Beatrice Milon , Laura Morrison , Manan Shah , Sarath Vijayakumar , Manoj Racherla , Carmen C Leitch , Lorna Silipino , Shadan Hadi , Michèle Weiss-Gayet , Emmanuèle Barras , Christoph D Schmid , Aouatef Ait-Lounis , Ashley Barnes , Yang Song , David J Eisenman , Efrat Eliyahu , Gregory I Frolenkov , Scott E Strome , Bénédicte Durand , Norann A Zaghloul , Sherri M Jones , Walter Reith , Ronna Hertzano

The draft genome of the grass carp (Ctenopharyngodon idellus) provides insights into its evolution and vegetarian adaptation.

Nat. Genet.     Yaping Wang , Ying Lu , Yong Zhang , Zemin Ning , Yan Li , Qiang Zhao , Hengyun Lu , Rong Huang , Xiaoqin Xia , Qi Feng , Xufang Liang , Kunyan Liu , Lei Zhang , Tingting Lu , Tao Huang , Danlin Fan , Qijun Weng , Chuanrang Zhu , Yiqi Lu , Wenjun Li , Ziruo Wen , Congcong Zhou , Qilin Tian , Xiaojun Kang , Mijuan Shi , Wanting Zhang , Songhun Jang , Fukuan Du , Shan He , Lanjie Liao , Yongming Li , Bin Gui , Huihui He , Zhen Ning , Cheng Yang , Libo He , Lifei Luo , Rui Yang , Qiong Luo , Xiaochun Liu , Shuisheng Li , Wen Huang , Ling Xiao , Haoran Lin , Bin Han , Zuoyan Zhu

Activating transcription factor 6 is necessary and sufficient for alcoholic fatty liver disease in zebrafish.

PLoS Genet     Deanna L Howarth , Claudia Lindtner , Ana M Vacaru , Ravi Sachidanandam , Orkhontuya Tsedensodnom , Taisa Vasilkova , Christoph Buettner , Kirsten C Sadler

Ethanol metabolism and oxidative stress are required for unfolded protein response activation and steatosis in zebrafish with alcoholic liver disease.

Dis Model Mech     Orkhontuya Tsedensodnom , Ana M Vacaru , Deanna L Howarth , Chunyue Yin , Kirsten C Sadler

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.

Brief. Bioinformatics     Pascale Gaudet , Michael S Livstone , Suzanna E Lewis , Paul D Thomas

Activating transcription factor 6 plays protective and pathological roles in steatosis due to endoplasmic reticulum stress in zebrafish.

Hepatology     Ayca Cinaroglu , Chuan Gao , Dru Imrie , Kirsten C Sadler

Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.

Proc. Natl. Acad. Sci. U.S.A.     Robert L Strausberg , Elise A Feingold , Lynette H Grouse , Jeffery G Derge , Richard D Klausner , Francis S Collins , Lukas Wagner , Carolyn M Shenmen , Gregory D Schuler , Stephen F Altschul , Barry Zeeberg , Kenneth H Buetow , Carl F Schaefer , Narayan K Bhat , Ralph F Hopkins , Heather Jordan , Troy Moore , Steve I Max , Jun Wang , Florence Hsieh , Luda Diatchenko , Kate Marusina , Andrew A Farmer , Gerald M Rubin , Ling Hong , Mark Stapleton , M Bento Soares , Maria F Bonaldo , Tom L Casavant , Todd E Scheetz , Michael J Brownstein , Ted B Usdin , Shiraki Toshiyuki , Piero Carninci , Christa Prange , Sam S Raha , Naomi A Loquellano , Garrick J Peters , Rick D Abramson , Sara J Mullahy , Stephanie A Bosak , Paul J McEwan , Kevin J McKernan , Joel A Malek , Preethi H Gunaratne , Stephen Richards , Kim C Worley , Sarah Hale , Angela M Garcia , Laura J Gay , Stephen W Hulyk , Debbie K Villalon , Donna M Muzny , Erica J Sodergren , Xiuhua Lu , Richard A Gibbs , Jessica Fahey , Erin Helton , Mark Ketteman , Anuradha Madan , Stephanie Rodrigues , Amy Sanchez , Michelle Whiting , Anup Madan , Alice C Young , Yuriy Shevchenko , Gerard G Bouffard , Robert W Blakesley , Jeffrey W Touchman , Eric D Green , Mark C Dickson , Alex C Rodriguez , Jane Grimwood , Jeremy Schmutz , Richard M Myers , Yaron S N Butterfield , Martin I Krzywinski , Ursula Skalska , Duane E Smailus , Angelique Schnerch , Jacqueline E Schein , Steven J M Jones , Marco A Marra , Mammalian Gene Collection Program Team