LOC4339017 - probable monofunctional riboflavin biosynthesis protein RIBA 3, chloroplastic-BMKCloudï½ç¾è¿å®¢äº

4339017 LOC4339017

基因描述

Type	Description
Definition	probable monofunctional riboflavin biosynthesis protein RIBA 3, chloroplastic

名称对应

Type	IDs
Synonymous	OJ1281_H05.8, OsJ_18816, RIBA3
Gene	UniProtKB-ID: RIBA3_ORYSJ UniprotKB: Q6L506 UniParc: UPI0000378058 EMBL: AC117265, CM000142, AY224441, AP008211, AP014961 EnsemblGenome: Os05g0460600 KO: osa:4339017
Nucleutide sequences	EMBL-CDS: AAO72560.1, BAS94403.1, AAT39168.1, EEE63987.1, BAF17671.1 Gene_ORFName: OJ1281_H05.8, OsJ_18816 EnsemblGenome_TRS: Os05t0460600-01
Protein sequencees	EnsemblGenome_PRO: Os05t0460600-01 RefSeq: XP_015637606.1, XP_015637605.1
Others	UniRef100: UniRef100_Q6L506 UniRef90: UniRef90_Q6L506 UniRef50: UniRef50_Q6NLQ7 UniGene: Os.7480

全选

{{proteinIndex+1}}	mRNA	Protein	UniprotKB	Description
Refseq	{{protein.nucleotideVersion}} Ensembl: {{protein.nucleotideEnsembl}}	{{protein.proteinVersion}} Ensembl: {{protein.proteinEnsembl}}	{{uniprot}}	Definition: {{{protein.definition}}} Transcript Veriant:{{protein.transcriptVeriant}} Status: {{protein.status}}
Location	( {{protein.positionStart}}..{{protein.positionEnd}} )
Conserved domain	Region: {{conservedDomain.region == '' \|\| conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' \|\| conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' \|\| conservedDomain.family == null ? "-": conservedDomain.family}} CDD:	{{conservedDomain.comments == '' \|\| conservedDomain.comments == null ? "-" : conservedDomain.comments }}	Region: {{conservedDomain.region == '' \|\| conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' \|\| conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' \|\| conservedDomain.family == null ? "-": conservedDomain.family}} CDD:	{{conservedDomain.comments == '' \|\| conservedDomain.comments == null ? "-" : conservedDomain.comments }}

mRNA

Protein

UniprotKB

Description

Refseq

Ensembl: {{protein.nucleotideEnsembl}}

Ensembl: {{protein.proteinEnsembl}}

Definition: {{{protein.definition}}}

Transcript Veriant:{{protein.transcriptVeriant}}

Status: {{protein.status}}

Location

( {{protein.positionStart}}..{{protein.positionEnd}} )

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Pubmed编号	文献信息	发表日期	相关基因
30866160	The Nucleotide-Dependent Interactome of Rice Heterotrimeric G-Protein Î± -Subunit. Proteomics Akshaya Kumar Biswal , Evan Wesley McConnell , Emily Grace Werth , Shuen-Fang Lo , Su-May Yu , Leslie M Hicks , Alan M Jones	2019-05-01	-
12869764	Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science Rice Full-Length cDNA Consortium , National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team , Shoshi Kikuchi , Kouji Satoh , Toshifumi Nagata , Nobuyuki Kawagashira , Koji Doi , Naoki Kishimoto , Junshi Yazaki , Masahiro Ishikawa , Hitomi Yamada , Hisako Ooka , Isamu Hotta , Keiichi Kojima , Takahiro Namiki , Eisuke Ohneda , Wataru Yahagi , Kohji Suzuki , Chao Jie Li , Kenji Ohtsuki , Toru Shishiki , Foundation of Advancement of International Science Genome Sequencing & Analysis Group , Yasuhiro Otomo , Kazuo Murakami , Yoshiharu Iida , Sumio Sugano , Tatsuto Fujimura , Yutaka Suzuki , Yuki Tsunoda , Takashi Kurosaki , Takeko Kodama , Hiromi Masuda , Michie Kobayashi , Quihong Xie , Min Lu , Ryuya Narikawa , Akio Sugiyama , Kouichi Mizuno , Satoko Yokomizo , Junko Niikura , Rieko Ikeda , Junya Ishibiki , Midori Kawamata , Akemi Yoshimura , Junichirou Miura , Takahiro Kusumegi , Mitsuru Oka , Risa Ryu , Mariko Ueda , Kenichi Matsubara , RIKEN , Jun Kawai , Piero Carninci , Jun Adachi , Katsunori Aizawa , Takahiro Arakawa , Shiro Fukuda , Ayako Hara , Wataru Hashizume , Norihito Hayatsu , Koichi Imotani , Yoshiyuki Ishii , Masayoshi Itoh , Ikuko Kagawa , Shinji Kondo , Hideaki Konno , Ai Miyazaki , Naoki Osato , Yoshimi Ota , Rintaro Saito , Daisuke Sasaki , Kenjiro Sato , Kazuhiro Shibata , Akira Shinagawa , Toshiyuki Shiraki , Masayasu Yoshino , Yoshihide Hayashizaki , Ayako Yasunishi	2003-07-18	LOC107275248, LOC107275250, LOC107275253, LOC107275255, LOC107275256, LOC107275259, LOC107275261, LOC107275262, LOC107275263, LOC107275264, LOC107275306, LOC107275307, LOC107275312, LOC107275619, LOC107275680, LOC107275691, LOC107275726, LOC107275738, LOC107275752, LOC107275757, LOC107275763, LOC107275790, LOC107275824, LOC107276004, LOC107276034, LOC107276097, LOC107276142, LOC107276212, Os02g0828400, LOC107276220, LOC107276258, LOC107276358, LOC107276423, LOC107276542, LOC107276549, LOC107276732, LOC107276869, LOC107276980, LOC107277164, LOC107277204, LOC107277268, LOC107277301, LOC107277343, LOC107277365, LOC107277382, LOC107277514, LOC107277808, LOC107277838, LOC107277846, LOC107277906, LOC107277929, LOC107278015, LOC107278020, LOC107278135, LOC107278293, LOC107278299, LOC107278318, LOC107278342, LOC107278347, LOC107278554, LOC107278573, LOC107278574, LOC107278578, LOC107278580, LOC107278586, LOC107278587, LOC107278605, LOC107278606, LOC107278609, LOC107278627, LOC107278649, LOC107278650, LOC107278708, LOC107278728, LOC107278744, LOC107278748, LOC107278754, LOC107278765, LOC107278767, LOC107278777, LOC107278782, LOC107278854, LOC107278943, LOC107279124, LOC107279387, LOC107279412, LOC107279818, LOC107279821, LOC107279824, LOC107279825, LOC107279826, LOC107279829, LOC107279842, LOC107279890, LOC107280037, LOC107280173, LOC107280196, LOC107280254, LOC107280391
12684538	A network of rice genes associated with stress response and seed development. Proc. Natl. Acad. Sci. U.S.A. Bret Cooper , Joseph D Clarke , Paul Budworth , Joel Kreps , Don Hutchison , Sylvia Park , Sonia Guimil , Molly Dunn , Peter LuginbÃ¼hl , Cinzia Ellero , Stephen A Goff , Jane Glazebrook	2003-04-15	LOC4324958, LOC4328187, LOC4328518, LOC4328752, LOC4329911, LOC4330032, LOC4330151, LOC4330327, LOC4330621, LOC4330769, LOC4330928, LOC4330958, LOC4331150, LOC4331187, LOC4331468, LOC4331591, LOC4331765, LOC4331978, LOC4332049, LOC4332197, LOC4332370, LOC4332401, LOC4332427, LOC4332431, LOC4332888, LOC4333543, LOC4333580, LOC4334129, LOC4334750, LOC4336279, LOC4336300, LOC4336542, LOC4336547, LOC4337257, LOC4337320, LOC4337338, LOC4337467, LOC4337734, LOC4338151, LOC4338782, LOC4338907, LOC4339017, LOC4339530, LOC4339702, LOC4339800, LOC4340071, LOC4340327, LOC4340644, LOC4340659, LOC4341354, LOC4341453, LOC4341763, LOC4341998, LOC4342343, LOC4342404, LOC4342743, LOC4343086, LOC4343584, LOC4344152, LOC4344249, LOC4344255, LOC4344326, LOC4344627, LOC4345338, LOC4345414, LOC4345685, LOC4345850, LOC4345973, LOC4346056, LOC4346297, LOC4346326, LOC4346460, LOC4347311, LOC4348724, LOC4349849, LOC4350981, LOC4351453, LOC4351779, LOC4351875, LOC4352525, LOC4352699, LOC9266860, LOC9270136

Pubmed编号

文献信息

发表日期

相关基因

30866160

The Nucleotide-Dependent Interactome of Rice Heterotrimeric G-Protein Î± -Subunit.

Proteomics Akshaya Kumar Biswal , Evan Wesley McConnell , Emily Grace Werth , Shuen-Fang Lo , Su-May Yu , Leslie M Hicks , Alan M Jones

2019-05-01

12869764

Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.

Science Rice Full-Length cDNA Consortium , National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team , Shoshi Kikuchi , Kouji Satoh , Toshifumi Nagata , Nobuyuki Kawagashira , Koji Doi , Naoki Kishimoto , Junshi Yazaki , Masahiro Ishikawa , Hitomi Yamada , Hisako Ooka , Isamu Hotta , Keiichi Kojima , Takahiro Namiki , Eisuke Ohneda , Wataru Yahagi , Kohji Suzuki , Chao Jie Li , Kenji Ohtsuki , Toru Shishiki , Foundation of Advancement of International Science Genome Sequencing & Analysis Group , Yasuhiro Otomo , Kazuo Murakami , Yoshiharu Iida , Sumio Sugano , Tatsuto Fujimura , Yutaka Suzuki , Yuki Tsunoda , Takashi Kurosaki , Takeko Kodama , Hiromi Masuda , Michie Kobayashi , Quihong Xie , Min Lu , Ryuya Narikawa , Akio Sugiyama , Kouichi Mizuno , Satoko Yokomizo , Junko Niikura , Rieko Ikeda , Junya Ishibiki , Midori Kawamata , Akemi Yoshimura , Junichirou Miura , Takahiro Kusumegi , Mitsuru Oka , Risa Ryu , Mariko Ueda , Kenichi Matsubara , RIKEN , Jun Kawai , Piero Carninci , Jun Adachi , Katsunori Aizawa , Takahiro Arakawa , Shiro Fukuda , Ayako Hara , Wataru Hashizume , Norihito Hayatsu , Koichi Imotani , Yoshiyuki Ishii , Masayoshi Itoh , Ikuko Kagawa , Shinji Kondo , Hideaki Konno , Ai Miyazaki , Naoki Osato , Yoshimi Ota , Rintaro Saito , Daisuke Sasaki , Kenjiro Sato , Kazuhiro Shibata , Akira Shinagawa , Toshiyuki Shiraki , Masayasu Yoshino , Yoshihide Hayashizaki , Ayako Yasunishi

2003-07-18

LOC107275248, LOC107275250, LOC107275253, LOC107275255, LOC107275256, LOC107275259, LOC107275261, LOC107275262, LOC107275263, LOC107275264, LOC107275306, LOC107275307, LOC107275312, LOC107275619, LOC107275680, LOC107275691, LOC107275726, LOC107275738, LOC107275752, LOC107275757, LOC107275763, LOC107275790, LOC107275824, LOC107276004, LOC107276034, LOC107276097, LOC107276142, LOC107276212, Os02g0828400, LOC107276220, LOC107276258, LOC107276358, LOC107276423, LOC107276542, LOC107276549, LOC107276732, LOC107276869, LOC107276980, LOC107277164, LOC107277204, LOC107277268, LOC107277301, LOC107277343, LOC107277365, LOC107277382, LOC107277514, LOC107277808, LOC107277838, LOC107277846, LOC107277906, LOC107277929, LOC107278015, LOC107278020, LOC107278135, LOC107278293, LOC107278299, LOC107278318, LOC107278342, LOC107278347, LOC107278554, LOC107278573, LOC107278574, LOC107278578, LOC107278580, LOC107278586, LOC107278587, LOC107278605, LOC107278606, LOC107278609, LOC107278627, LOC107278649, LOC107278650, LOC107278708, LOC107278728, LOC107278744, LOC107278748, LOC107278754, LOC107278765, LOC107278767, LOC107278777, LOC107278782, LOC107278854, LOC107278943, LOC107279124, LOC107279387, LOC107279412, LOC107279818, LOC107279821, LOC107279824, LOC107279825, LOC107279826, LOC107279829, LOC107279842, LOC107279890, LOC107280037, LOC107280173, LOC107280196, LOC107280254, LOC107280391

12684538

A network of rice genes associated with stress response and seed development.

Proc. Natl. Acad. Sci. U.S.A. Bret Cooper , Joseph D Clarke , Paul Budworth , Joel Kreps , Don Hutchison , Sylvia Park , Sonia Guimil , Molly Dunn , Peter LuginbÃ¼hl , Cinzia Ellero , Stephen A Goff , Jane Glazebrook

2003-04-15

LOC4324958, LOC4328187, LOC4328518, LOC4328752, LOC4329911, LOC4330032, LOC4330151, LOC4330327, LOC4330621, LOC4330769, LOC4330928, LOC4330958, LOC4331150, LOC4331187, LOC4331468, LOC4331591, LOC4331765, LOC4331978, LOC4332049, LOC4332197, LOC4332370, LOC4332401, LOC4332427, LOC4332431, LOC4332888, LOC4333543, LOC4333580, LOC4334129, LOC4334750, LOC4336279, LOC4336300, LOC4336542, LOC4336547, LOC4337257, LOC4337320, LOC4337338, LOC4337467, LOC4337734, LOC4338151, LOC4338782, LOC4338907, LOC4339017, LOC4339530, LOC4339702, LOC4339800, LOC4340071, LOC4340327, LOC4340644, LOC4340659, LOC4341354, LOC4341453, LOC4341763, LOC4341998, LOC4342343, LOC4342404, LOC4342743, LOC4343086, LOC4343584, LOC4344152, LOC4344249, LOC4344255, LOC4344326, LOC4344627, LOC4345338, LOC4345414, LOC4345685, LOC4345850, LOC4345973, LOC4346056, LOC4346297, LOC4346326, LOC4346460, LOC4347311, LOC4348724, LOC4349849, LOC4350981, LOC4351453, LOC4351779, LOC4351875, LOC4352525, LOC4352699, LOC9266860, LOC9270136

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