LOC4334471 - transcription factor BHLH089-like-BMKCloudï½ç¾è¿å®¢äº

4334471 LOC4334471

基因描述

Type	Description
Definition	transcription factor BHLH089-like

研究结论

Date	Results	Publications
2014-02-01 10:46:00	Results indicate that RICE SALT SENSITIVE3 (RSS3) can specifically interact with bHLH094 (Os07g0193800) and bHLH089 (Os03g0802900).	23715469

名称对应

Type	IDs
Gene	UniProtKB-ID: BH089_ORYSJ UniprotKB: Q84T08 UniParc: UPI0000056101 EMBL: AP014959, DP000009, AC108906, AP008209, HQ858847 EnsemblGenome: Os03g0802900 KO: osa:4334471
Nucleutide sequences	EMBL-CDS: ABF99407.1, BAS86910.1, AAO72370.1, ADX60259.1, BAF13519.1 Gene_ORFName: OSJNBa0087C10.10 EnsemblGenome_TRS: Os03t0802900-01
Protein sequencees	EnsemblGenome_PRO: Os03t0802900-01 RefSeq: XP_015629323.1
Others	UniRef100: UniRef100_Q84T08 UniRef90: UniRef90_Q84T08 UniRef50: UniRef50_Q69WS3 UniGene: Os.33544

全选

{{proteinIndex+1}}	mRNA	Protein	UniprotKB	Description
Refseq	{{protein.nucleotideVersion}} Ensembl: {{protein.nucleotideEnsembl}}	{{protein.proteinVersion}} Ensembl: {{protein.proteinEnsembl}}	{{uniprot}}	Definition: {{{protein.definition}}} Transcript Veriant:{{protein.transcriptVeriant}} Status: {{protein.status}}
Location	( {{protein.positionStart}}..{{protein.positionEnd}} )
Conserved domain	Region: {{conservedDomain.region == '' \|\| conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' \|\| conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' \|\| conservedDomain.family == null ? "-": conservedDomain.family}} CDD:	{{conservedDomain.comments == '' \|\| conservedDomain.comments == null ? "-" : conservedDomain.comments }}	Region: {{conservedDomain.region == '' \|\| conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' \|\| conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' \|\| conservedDomain.family == null ? "-": conservedDomain.family}} CDD:	{{conservedDomain.comments == '' \|\| conservedDomain.comments == null ? "-" : conservedDomain.comments }}

mRNA

Protein

UniprotKB

Description

Refseq

Ensembl: {{protein.nucleotideEnsembl}}

Ensembl: {{protein.proteinEnsembl}}

Definition: {{{protein.definition}}}

Transcript Veriant:{{protein.transcriptVeriant}}

Status: {{protein.status}}

Location

( {{protein.positionStart}}..{{protein.positionEnd}} )

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全选

Pubmed编号	文献信息	发表日期	相关基因
23715469	RICE SALT SENSITIVE3 forms a ternary complex with JAZ and class-C bHLH factors and regulates jasmonate-induced gene expression and root cell elongation. Plant Cell Yosuke Toda , Maiko Tanaka , Daisuke Ogawa , Kyo Kurata , Ken-Ichi Kurotani , Yoshiki Habu , Tsuyu Ando , Kazuhiko Sugimoto , Nobutaka Mitsuda , Etsuko Katoh , Kiyomi Abe , Akio Miyao , Hirohiko Hirochika , Tsukaho Hattori , Shin Takeda	2013-05-01	LOC4331832, LOC4331833, LOC4334471, LOC4342637, LOC4350435
18987217	GRASSIUS: a platform for comparative regulatory genomics across the grasses. Plant Physiol. Alper Yilmaz , Milton Y Nishiyama , Bernardo Garcia Fuentes , Glaucia Mendes Souza , Daniel Janies , John Gray , Erich Grotewold	2009-01-01	LOC4324327, LOC4325038, LOC4325308, LOC4325454, LOC4325658, LOC4325898, LOC4325945, LOC4326144, LOC4326690, LOC4326959, LOC4327304, LOC4327325, LOC4328080, LOC4328461, LOC4329217, LOC4329340, LOC4329577, LOC4329923, LOC4330144, LOC4330385, LOC4331538, LOC4331887, LOC4332200, LOC4333197, LOC4333691, LOC4334060, LOC4334062, LOC4334181, LOC4334213, LOC4334429, LOC4334471, LOC4334592, LOC4334593, LOC4335388, LOC4336535, LOC4336561, LOC4336585, LOC4336676, LOC4337362, LOC4337537, LOC4337756, LOC4337998, LOC4339125, LOC4339158, LOC4339665, LOC4339780, LOC4340749, LOC4341722, LOC4343519, LOC4343736, LOC4343984, LOC4344296, LOC4344331, LOC4344349, LOC4344354, LOC4344443, LOC4344627, LOC4345388, LOC4345456, LOC4345625, LOC4345697, LOC4345867, LOC4345899, LOC4346003, LOC4346087, LOC4346884, LOC4347259, LOC4347355, LOC4347711, LOC4350545, LOC4350685, Os05g0126400, LOC100037755, myb31, cl51309_1, myb39, myb42, myb8, BAD1, pco137346, SBP12, LOC100191731, LOC100192577, LOC100192747, LOC100192914, LOC100193399, LOC100193442, LOC100193483, LOC100193706, LOC100216639, LOC100216893, LOC100216929, gpm690, pco101600(436), LOC100272346, pco141536, gpm41, LOC100272660, LOC100272663
12869764	Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science Rice Full-Length cDNA Consortium , National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team , Shoshi Kikuchi , Kouji Satoh , Toshifumi Nagata , Nobuyuki Kawagashira , Koji Doi , Naoki Kishimoto , Junshi Yazaki , Masahiro Ishikawa , Hitomi Yamada , Hisako Ooka , Isamu Hotta , Keiichi Kojima , Takahiro Namiki , Eisuke Ohneda , Wataru Yahagi , Kohji Suzuki , Chao Jie Li , Kenji Ohtsuki , Toru Shishiki , Foundation of Advancement of International Science Genome Sequencing & Analysis Group , Yasuhiro Otomo , Kazuo Murakami , Yoshiharu Iida , Sumio Sugano , Tatsuto Fujimura , Yutaka Suzuki , Yuki Tsunoda , Takashi Kurosaki , Takeko Kodama , Hiromi Masuda , Michie Kobayashi , Quihong Xie , Min Lu , Ryuya Narikawa , Akio Sugiyama , Kouichi Mizuno , Satoko Yokomizo , Junko Niikura , Rieko Ikeda , Junya Ishibiki , Midori Kawamata , Akemi Yoshimura , Junichirou Miura , Takahiro Kusumegi , Mitsuru Oka , Risa Ryu , Mariko Ueda , Kenichi Matsubara , RIKEN , Jun Kawai , Piero Carninci , Jun Adachi , Katsunori Aizawa , Takahiro Arakawa , Shiro Fukuda , Ayako Hara , Wataru Hashizume , Norihito Hayatsu , Koichi Imotani , Yoshiyuki Ishii , Masayoshi Itoh , Ikuko Kagawa , Shinji Kondo , Hideaki Konno , Ai Miyazaki , Naoki Osato , Yoshimi Ota , Rintaro Saito , Daisuke Sasaki , Kenjiro Sato , Kazuhiro Shibata , Akira Shinagawa , Toshiyuki Shiraki , Masayasu Yoshino , Yoshihide Hayashizaki , Ayako Yasunishi	2003-07-18	LOC107275248, LOC107275250, LOC107275253, LOC107275255, LOC107275256, LOC107275259, LOC107275261, LOC107275262, LOC107275263, LOC107275264, LOC107275306, LOC107275307, LOC107275312, LOC107275619, LOC107275680, LOC107275691, LOC107275726, LOC107275738, LOC107275752, LOC107275757, LOC107275763, LOC107275790, LOC107275824, LOC107276004, LOC107276034, LOC107276097, LOC107276142, LOC107276212, Os02g0828400, LOC107276220, LOC107276258, LOC107276358, LOC107276423, LOC107276542, LOC107276549, LOC107276732, LOC107276869, LOC107276980, LOC107277164, LOC107277204, LOC107277268, LOC107277301, LOC107277343, LOC107277365, LOC107277382, LOC107277514, LOC107277808, LOC107277838, LOC107277846, LOC107277906, LOC107277929, LOC107278015, LOC107278020, LOC107278135, LOC107278293, LOC107278299, LOC107278318, LOC107278342, LOC107278347, LOC107278554, LOC107278573, LOC107278574, LOC107278578, LOC107278580, LOC107278586, LOC107278587, LOC107278605, LOC107278606, LOC107278609, LOC107278627, LOC107278649, LOC107278650, LOC107278708, LOC107278728, LOC107278744, LOC107278748, LOC107278754, LOC107278765, LOC107278767, LOC107278777, LOC107278782, LOC107278854, LOC107278943, LOC107279124, LOC107279387, LOC107279412, LOC107279818, LOC107279821, LOC107279824, LOC107279825, LOC107279826, LOC107279829, LOC107279842, LOC107279890, LOC107280037, LOC107280173, LOC107280196, LOC107280254, LOC107280391

Pubmed编号

文献信息

发表日期

相关基因

23715469

RICE SALT SENSITIVE3 forms a ternary complex with JAZ and class-C bHLH factors and regulates jasmonate-induced gene expression and root cell elongation.

Plant Cell Yosuke Toda , Maiko Tanaka , Daisuke Ogawa , Kyo Kurata , Ken-Ichi Kurotani , Yoshiki Habu , Tsuyu Ando , Kazuhiko Sugimoto , Nobutaka Mitsuda , Etsuko Katoh , Kiyomi Abe , Akio Miyao , Hirohiko Hirochika , Tsukaho Hattori , Shin Takeda

2013-05-01

LOC4331832, LOC4331833, LOC4334471, LOC4342637, LOC4350435

18987217

GRASSIUS: a platform for comparative regulatory genomics across the grasses.

Plant Physiol. Alper Yilmaz , Milton Y Nishiyama , Bernardo Garcia Fuentes , Glaucia Mendes Souza , Daniel Janies , John Gray , Erich Grotewold

2009-01-01

LOC4324327, LOC4325038, LOC4325308, LOC4325454, LOC4325658, LOC4325898, LOC4325945, LOC4326144, LOC4326690, LOC4326959, LOC4327304, LOC4327325, LOC4328080, LOC4328461, LOC4329217, LOC4329340, LOC4329577, LOC4329923, LOC4330144, LOC4330385, LOC4331538, LOC4331887, LOC4332200, LOC4333197, LOC4333691, LOC4334060, LOC4334062, LOC4334181, LOC4334213, LOC4334429, LOC4334471, LOC4334592, LOC4334593, LOC4335388, LOC4336535, LOC4336561, LOC4336585, LOC4336676, LOC4337362, LOC4337537, LOC4337756, LOC4337998, LOC4339125, LOC4339158, LOC4339665, LOC4339780, LOC4340749, LOC4341722, LOC4343519, LOC4343736, LOC4343984, LOC4344296, LOC4344331, LOC4344349, LOC4344354, LOC4344443, LOC4344627, LOC4345388, LOC4345456, LOC4345625, LOC4345697, LOC4345867, LOC4345899, LOC4346003, LOC4346087, LOC4346884, LOC4347259, LOC4347355, LOC4347711, LOC4350545, LOC4350685, Os05g0126400, LOC100037755, myb31, cl51309_1, myb39, myb42, myb8, BAD1, pco137346, SBP12, LOC100191731, LOC100192577, LOC100192747, LOC100192914, LOC100193399, LOC100193442, LOC100193483, LOC100193706, LOC100216639, LOC100216893, LOC100216929, gpm690, pco101600(436), LOC100272346, pco141536, gpm41, LOC100272660, LOC100272663

12869764

Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.

Science Rice Full-Length cDNA Consortium , National Institute of Agrobiological Sciences Rice Full-Length cDNA Project Team , Shoshi Kikuchi , Kouji Satoh , Toshifumi Nagata , Nobuyuki Kawagashira , Koji Doi , Naoki Kishimoto , Junshi Yazaki , Masahiro Ishikawa , Hitomi Yamada , Hisako Ooka , Isamu Hotta , Keiichi Kojima , Takahiro Namiki , Eisuke Ohneda , Wataru Yahagi , Kohji Suzuki , Chao Jie Li , Kenji Ohtsuki , Toru Shishiki , Foundation of Advancement of International Science Genome Sequencing & Analysis Group , Yasuhiro Otomo , Kazuo Murakami , Yoshiharu Iida , Sumio Sugano , Tatsuto Fujimura , Yutaka Suzuki , Yuki Tsunoda , Takashi Kurosaki , Takeko Kodama , Hiromi Masuda , Michie Kobayashi , Quihong Xie , Min Lu , Ryuya Narikawa , Akio Sugiyama , Kouichi Mizuno , Satoko Yokomizo , Junko Niikura , Rieko Ikeda , Junya Ishibiki , Midori Kawamata , Akemi Yoshimura , Junichirou Miura , Takahiro Kusumegi , Mitsuru Oka , Risa Ryu , Mariko Ueda , Kenichi Matsubara , RIKEN , Jun Kawai , Piero Carninci , Jun Adachi , Katsunori Aizawa , Takahiro Arakawa , Shiro Fukuda , Ayako Hara , Wataru Hashizume , Norihito Hayatsu , Koichi Imotani , Yoshiyuki Ishii , Masayoshi Itoh , Ikuko Kagawa , Shinji Kondo , Hideaki Konno , Ai Miyazaki , Naoki Osato , Yoshimi Ota , Rintaro Saito , Daisuke Sasaki , Kenjiro Sato , Kazuhiro Shibata , Akira Shinagawa , Toshiyuki Shiraki , Masayasu Yoshino , Yoshihide Hayashizaki , Ayako Yasunishi

2003-07-18

LOC107275248, LOC107275250, LOC107275253, LOC107275255, LOC107275256, LOC107275259, LOC107275261, LOC107275262, LOC107275263, LOC107275264, LOC107275306, LOC107275307, LOC107275312, LOC107275619, LOC107275680, LOC107275691, LOC107275726, LOC107275738, LOC107275752, LOC107275757, LOC107275763, LOC107275790, LOC107275824, LOC107276004, LOC107276034, LOC107276097, LOC107276142, LOC107276212, Os02g0828400, LOC107276220, LOC107276258, LOC107276358, LOC107276423, LOC107276542, LOC107276549, LOC107276732, LOC107276869, LOC107276980, LOC107277164, LOC107277204, LOC107277268, LOC107277301, LOC107277343, LOC107277365, LOC107277382, LOC107277514, LOC107277808, LOC107277838, LOC107277846, LOC107277906, LOC107277929, LOC107278015, LOC107278020, LOC107278135, LOC107278293, LOC107278299, LOC107278318, LOC107278342, LOC107278347, LOC107278554, LOC107278573, LOC107278574, LOC107278578, LOC107278580, LOC107278586, LOC107278587, LOC107278605, LOC107278606, LOC107278609, LOC107278627, LOC107278649, LOC107278650, LOC107278708, LOC107278728, LOC107278744, LOC107278748, LOC107278754, LOC107278765, LOC107278767, LOC107278777, LOC107278782, LOC107278854, LOC107278943, LOC107279124, LOC107279387, LOC107279412, LOC107279818, LOC107279821, LOC107279824, LOC107279825, LOC107279826, LOC107279829, LOC107279842, LOC107279890, LOC107280037, LOC107280173, LOC107280196, LOC107280254, LOC107280391

研究热度

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