SSU72 - SSU72 homolog, RNA polymerase II CTD phosphatase-BMKCloudï½ç¾è¿å®¢äº

419410 SSU72

基因描述

Type	Description
Definition	SSU72 homolog, RNA polymerase II CTD phosphatase

研究结论

Date	Results	Publications
2015-11-28 11:23:00	Results suggest that chicken Ssu72 plays positive roles in 3'-end formation of snRNAs and polyadenylated mRNAs, but negative roles in 3'- end formation of histone mRNAs, through dephosphorylation of both Ser5 and Ser7 of the carboxy-terminal domain.	25166011

名称对应

Type	IDs
Gene	UniProtKB-ID: SSU72_CHICK UniprotKB: Q5ZJQ7 UniParc: UPI00003AC3DD EMBL: AJ720377 Ensembl: ENSGALG00000001489 KO: gga:419410
Nucleutide sequences	EMBL-CDS: CAG32036.1 Gene_ORFName: RCJMB04_16f24 Ensembl_TRS: ENSGALT00000002258
Protein sequencees	Ensembl_PRO: ENSGALP00000002256 RefSeq: NP_001007876.1
Others	UniRef100: UniRef100_Q5ZJQ7 UniRef90: UniRef90_Q9NP77 UniRef50: UniRef50_Q9NP77 UniGene: Gga.9388

全选

{{proteinIndex+1}}	mRNA	Protein	UniprotKB	Description
Refseq	{{protein.nucleotideVersion}} Ensembl: {{protein.nucleotideEnsembl}}	{{protein.proteinVersion}} Ensembl: {{protein.proteinEnsembl}}	{{uniprot}}	Definition: {{{protein.definition}}} Transcript Veriant:{{protein.transcriptVeriant}} Status: {{protein.status}}
Location	( {{protein.positionStart}}..{{protein.positionEnd}} )
Conserved domain	Region: {{conservedDomain.region == '' \|\| conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' \|\| conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' \|\| conservedDomain.family == null ? "-": conservedDomain.family}} CDD:	{{conservedDomain.comments == '' \|\| conservedDomain.comments == null ? "-" : conservedDomain.comments }}	Region: {{conservedDomain.region == '' \|\| conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' \|\| conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' \|\| conservedDomain.family == null ? "-": conservedDomain.family}} CDD:	{{conservedDomain.comments == '' \|\| conservedDomain.comments == null ? "-" : conservedDomain.comments }}

mRNA

Protein

UniprotKB

Description

Refseq

Ensembl: {{protein.nucleotideEnsembl}}

Ensembl: {{protein.proteinEnsembl}}

Definition: {{{protein.definition}}}

Transcript Veriant:{{protein.transcriptVeriant}}

Status: {{protein.status}}

Location

( {{protein.positionStart}}..{{protein.positionEnd}} )

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Pubmed编号	文献信息	发表日期	相关基因
25166011	Vertebrate Ssu72 regulates and coordinates 3'-end formation of RNAs transcribed by RNA polymerase II. PLoS ONE Shotaro Wani , Masamichi Yuda , Yosuke Fujiwara , Masaya Yamamoto , Fumio Harada , Yoshiaki Ohkuma , Yutaka Hirose	2014-01-01	SSU72
21873635	Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics Pascale Gaudet , Michael S Livstone , Suzanna E Lewis , Paul D Thomas	2011-09-01	-
15642098	Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Genome Biol. Randolph B Caldwell , Andrzej M Kierzek , Hiroshi Arakawa , Yuri Bezzubov , Jolanta Zaim , Petra Fiedler , Stefan Kutter , Artem Blagodatski , Diyana Kostovska , Marek Koter , Jiri Plachy , Piero Carninci , Yoshihide Hayashizaki , Jean-Marie Buerstedde	2005-01-01	CNN2, PSMD4, RAB5B, LOC100857165, CDC42SE1, TMEM208, RPS26, GM2A, CHRAC1, PBDC1, MIEN1, UPF3B, EIF4B, CATHB1, TRAPPC5, MRPL43, SYNGR2, LOC100859434, FARSA, SIGMAR1, LOC100859759, TIMM9, CYBA, C15orf61, C19orf24, FAM195B, GLOD4, PRMT5, SRPRB, LOC101750603, SETD6, PMS2P11, SIRT7, LOC107049843, KRTCAP2, RPL28, LOC107051321, LOC107051345, TFAM, HK1, ADD3, PALD1, UGP2, ACTN1, CELF1, SUMO1, EGR1, VAV3, EEF1A1, POU2AF1, ACO2, DIAPH1, DDB1, TRAF5, SLC25A6, BTK, ADARB1, CDKN1B, ADAM10, NDUFS4, TNFSF13B, LSP1, CD81, CHEK1, IL16, HZGJ, PPP3CB, CSNK1E, FANCG, TNFSF10, STX2, TERF1, FAM53A, SGMS1, SLA, PYGL, PSMB7, TRIB2, RIPK1, BUB1B, POFUT1, ALG6, NT5C3A, TPX2, TNFRSF1B, CREB1, POLH, CCNL2, AVEN, NDC80, NUF2, ST3GAL6, ST3GAL2, HMGCR, TCF3, HS6ST2, HNRNPH1, NF2, BHLHE23

Pubmed编号

文献信息

发表日期

相关基因

25166011

Vertebrate Ssu72 regulates and coordinates 3'-end formation of RNAs transcribed by RNA polymerase II.

PLoS ONE Shotaro Wani , Masamichi Yuda , Yosuke Fujiwara , Masaya Yamamoto , Fumio Harada , Yoshiaki Ohkuma , Yutaka Hirose

2014-01-01

SSU72

21873635

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.

Brief. Bioinformatics Pascale Gaudet , Michael S Livstone , Suzanna E Lewis , Paul D Thomas

2011-09-01

15642098

Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis.

Genome Biol. Randolph B Caldwell , Andrzej M Kierzek , Hiroshi Arakawa , Yuri Bezzubov , Jolanta Zaim , Petra Fiedler , Stefan Kutter , Artem Blagodatski , Diyana Kostovska , Marek Koter , Jiri Plachy , Piero Carninci , Yoshihide Hayashizaki , Jean-Marie Buerstedde

2005-01-01

CNN2, PSMD4, RAB5B, LOC100857165, CDC42SE1, TMEM208, RPS26, GM2A, CHRAC1, PBDC1, MIEN1, UPF3B, EIF4B, CATHB1, TRAPPC5, MRPL43, SYNGR2, LOC100859434, FARSA, SIGMAR1, LOC100859759, TIMM9, CYBA, C15orf61, C19orf24, FAM195B, GLOD4, PRMT5, SRPRB, LOC101750603, SETD6, PMS2P11, SIRT7, LOC107049843, KRTCAP2, RPL28, LOC107051321, LOC107051345, TFAM, HK1, ADD3, PALD1, UGP2, ACTN1, CELF1, SUMO1, EGR1, VAV3, EEF1A1, POU2AF1, ACO2, DIAPH1, DDB1, TRAF5, SLC25A6, BTK, ADARB1, CDKN1B, ADAM10, NDUFS4, TNFSF13B, LSP1, CD81, CHEK1, IL16, HZGJ, PPP3CB, CSNK1E, FANCG, TNFSF10, STX2, TERF1, FAM53A, SGMS1, SLA, PYGL, PSMB7, TRIB2, RIPK1, BUB1B, POFUT1, ALG6, NT5C3A, TPX2, TNFRSF1B, CREB1, POLH, CCNL2, AVEN, NDC80, NUF2, ST3GAL6, ST3GAL2, HMGCR, TCF3, HS6ST2, HNRNPH1, NF2, BHLHE23

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