CPSF6 - cleavage and polyadenylation specific factor 6-BMKCloudï½ç¾è¿å®¢äº

417844 CPSF6

基因描述

Type	Description
Definition	cleavage and polyadenylation specific factor 6

名称对应

Type	IDs
Gene	UniProtKB-ID: CPSF6_CHICK, F1NGU9_CHICK, A0A1D5P9A5_CHICK UniprotKB: Q5ZL34, F1NGU9, A0A1D5P9A5 UniParc: UPI00039582E6, UPI00071A9D4C, UPI0000443594 EMBL: AJ719900, AADN05000096 Ensembl: ENSGALG00000019355 KO: gga:417844
Nucleutide sequences	EMBL-CDS: CAG31559.1 Gene_ORFName: RCJMB04_7p13 Ensembl_TRS: ENSGALT00000016192, ENSGALT00000081509
Protein sequencees	Ensembl_PRO: ENSGALP00000016173, ENSGALP00000049306 RefSeq: XP_015137219.1, XP_015137210.1, NP_001034360.2, XP_015137225.1, XP_015137214.1
Others	UniRef100: UniRef100_A0A674HB46, UniRef100_F1NGU9, UniRef100_Q5ZL34 UniRef90: UniRef90_A0A3Q0GVG9, UniRef90_Q0P5D2 UniRef50: UniRef50_Q6NVF9, UniRef50_Q16630-3 UniGene: Gga.22011

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{{proteinIndex+1}}	mRNA	Protein	UniprotKB	Description
Refseq	{{protein.nucleotideVersion}} Ensembl: {{protein.nucleotideEnsembl}}	{{protein.proteinVersion}} Ensembl: {{protein.proteinEnsembl}}	{{uniprot}}	Definition: {{{protein.definition}}} Transcript Veriant:{{protein.transcriptVeriant}} Status: {{protein.status}}
Location	( {{protein.positionStart}}..{{protein.positionEnd}} )
Conserved domain	Region: {{conservedDomain.region == '' \|\| conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' \|\| conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' \|\| conservedDomain.family == null ? "-": conservedDomain.family}} CDD:	{{conservedDomain.comments == '' \|\| conservedDomain.comments == null ? "-" : conservedDomain.comments }}	Region: {{conservedDomain.region == '' \|\| conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' \|\| conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' \|\| conservedDomain.family == null ? "-": conservedDomain.family}} CDD:	{{conservedDomain.comments == '' \|\| conservedDomain.comments == null ? "-" : conservedDomain.comments }}

mRNA

Protein

UniprotKB

Description

Refseq

Ensembl: {{protein.nucleotideEnsembl}}

Ensembl: {{protein.proteinEnsembl}}

Definition: {{{protein.definition}}}

Transcript Veriant:{{protein.transcriptVeriant}}

Status: {{protein.status}}

Location

( {{protein.positionStart}}..{{protein.positionEnd}} )

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Pubmed编号	文献信息	发表日期	相关基因
16554550	Chicken genomics resource: sequencing and annotation of 35,407 ESTs from single and multiple tissue cDNA libraries and CAP3 assembly of a chicken gene index. Physiol. Genomics Wilfrid Carre , Xiaofei Wang , Tom E Porter , Yves Nys , Jianshan Tang , Erin Bernberg , Robin Morgan , Joan Burnside , Samuel E Aggrey , Jean Simon , Larry A Cogburn	2006-05-16	C9orf69, SIGMAR1, LOC101747680, C15orf61, PHF13, GLOD4, FGB, PRRX1, RGS3, HES4, NEBL, RDM1, CITED4, TAX1BP1, EIF5B, SYNM, PSAP, CD44, SDHA, PON2, NME4, ZNF335, BMP4, CCNB3, CALCA, COL6A2, KBP, FGA, COL3A1, CSF1R, PTPN2, THRB, PRNP, VKORC1, UBL7, MFGE8, CNEP1R1, CDH1, TXNRD3, FAXDC2, FBXL16, MSRB1, C16ORF45, CDIP1, MAL, TXNRD2, CORO1C, NIPSNAP1, TRIM39.2, RACK1, SURF1, EXOSC2, GATSL2, SERPINF1, ZSWIM7, ERGIC2, HBP1, DNAJC2, CRELD2, IMMP2L, SLC38A4, TBK1, SLC35E3, EMP1, SERHL2, MPST, AKR1D1, RAB19, VAMP1, CMSS1, SH2D1B, ADPRH, HSPA13, STAG3, CLDN10, ESD, CAB39L, PDS5B, HSPH1, GTF3A, MPHOSPH8, MMP10, C1H11ORF54, CPNE1, COMMD7, VAMP3, GNB1, SEPN1, SYF2, IQCC, REXO2, RP11-156P1.2, FKBP8, CHERP, KLF2, LACTB2, NECAB1, TMEM55A, TSTA3
15642098	Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Genome Biol. Randolph B Caldwell , Andrzej M Kierzek , Hiroshi Arakawa , Yuri Bezzubov , Jolanta Zaim , Petra Fiedler , Stefan Kutter , Artem Blagodatski , Diyana Kostovska , Marek Koter , Jiri Plachy , Piero Carninci , Yoshihide Hayashizaki , Jean-Marie Buerstedde	2005-01-01	CNN2, PSMD4, RAB5B, LOC100857165, CDC42SE1, TMEM208, RPS26, GM2A, CHRAC1, PBDC1, MIEN1, UPF3B, EIF4B, CATHB1, TRAPPC5, MRPL43, SYNGR2, LOC100859434, FARSA, SIGMAR1, LOC100859759, TIMM9, CYBA, C15orf61, C19orf24, FAM195B, GLOD4, PRMT5, SRPRB, LOC101750603, SETD6, PMS2P11, SIRT7, LOC107049843, KRTCAP2, RPL28, LOC107051321, LOC107051345, TFAM, HK1, ADD3, PALD1, UGP2, ACTN1, CELF1, SUMO1, EGR1, VAV3, EEF1A1, POU2AF1, ACO2, DIAPH1, DDB1, TRAF5, SLC25A6, BTK, ADARB1, CDKN1B, ADAM10, NDUFS4, TNFSF13B, LSP1, CD81, CHEK1, IL16, HZGJ, PPP3CB, CSNK1E, FANCG, TNFSF10, STX2, TERF1, FAM53A, SGMS1, SLA, PYGL, PSMB7, TRIB2, RIPK1, BUB1B, POFUT1, ALG6, NT5C3A, TPX2, TNFRSF1B, CREB1, POLH, CCNL2, AVEN, NDC80, NUF2, ST3GAL6, ST3GAL2, HMGCR, TCF3, HS6ST2, HNRNPH1, NF2, BHLHE23

Pubmed编号

文献信息

发表日期

相关基因

16554550

Chicken genomics resource: sequencing and annotation of 35,407 ESTs from single and multiple tissue cDNA libraries and CAP3 assembly of a chicken gene index.

Physiol. Genomics Wilfrid Carre , Xiaofei Wang , Tom E Porter , Yves Nys , Jianshan Tang , Erin Bernberg , Robin Morgan , Joan Burnside , Samuel E Aggrey , Jean Simon , Larry A Cogburn

2006-05-16

C9orf69, SIGMAR1, LOC101747680, C15orf61, PHF13, GLOD4, FGB, PRRX1, RGS3, HES4, NEBL, RDM1, CITED4, TAX1BP1, EIF5B, SYNM, PSAP, CD44, SDHA, PON2, NME4, ZNF335, BMP4, CCNB3, CALCA, COL6A2, KBP, FGA, COL3A1, CSF1R, PTPN2, THRB, PRNP, VKORC1, UBL7, MFGE8, CNEP1R1, CDH1, TXNRD3, FAXDC2, FBXL16, MSRB1, C16ORF45, CDIP1, MAL, TXNRD2, CORO1C, NIPSNAP1, TRIM39.2, RACK1, SURF1, EXOSC2, GATSL2, SERPINF1, ZSWIM7, ERGIC2, HBP1, DNAJC2, CRELD2, IMMP2L, SLC38A4, TBK1, SLC35E3, EMP1, SERHL2, MPST, AKR1D1, RAB19, VAMP1, CMSS1, SH2D1B, ADPRH, HSPA13, STAG3, CLDN10, ESD, CAB39L, PDS5B, HSPH1, GTF3A, MPHOSPH8, MMP10, C1H11ORF54, CPNE1, COMMD7, VAMP3, GNB1, SEPN1, SYF2, IQCC, REXO2, RP11-156P1.2, FKBP8, CHERP, KLF2, LACTB2, NECAB1, TMEM55A, TSTA3

15642098

Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis.

Genome Biol. Randolph B Caldwell , Andrzej M Kierzek , Hiroshi Arakawa , Yuri Bezzubov , Jolanta Zaim , Petra Fiedler , Stefan Kutter , Artem Blagodatski , Diyana Kostovska , Marek Koter , Jiri Plachy , Piero Carninci , Yoshihide Hayashizaki , Jean-Marie Buerstedde

2005-01-01

CNN2, PSMD4, RAB5B, LOC100857165, CDC42SE1, TMEM208, RPS26, GM2A, CHRAC1, PBDC1, MIEN1, UPF3B, EIF4B, CATHB1, TRAPPC5, MRPL43, SYNGR2, LOC100859434, FARSA, SIGMAR1, LOC100859759, TIMM9, CYBA, C15orf61, C19orf24, FAM195B, GLOD4, PRMT5, SRPRB, LOC101750603, SETD6, PMS2P11, SIRT7, LOC107049843, KRTCAP2, RPL28, LOC107051321, LOC107051345, TFAM, HK1, ADD3, PALD1, UGP2, ACTN1, CELF1, SUMO1, EGR1, VAV3, EEF1A1, POU2AF1, ACO2, DIAPH1, DDB1, TRAF5, SLC25A6, BTK, ADARB1, CDKN1B, ADAM10, NDUFS4, TNFSF13B, LSP1, CD81, CHEK1, IL16, HZGJ, PPP3CB, CSNK1E, FANCG, TNFSF10, STX2, TERF1, FAM53A, SGMS1, SLA, PYGL, PSMB7, TRIB2, RIPK1, BUB1B, POFUT1, ALG6, NT5C3A, TPX2, TNFRSF1B, CREB1, POLH, CCNL2, AVEN, NDC80, NUF2, ST3GAL6, ST3GAL2, HMGCR, TCF3, HS6ST2, HNRNPH1, NF2, BHLHE23

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