Type | Description |
---|---|
Definition | SOX2 overlapping transcript (non-protein coding) |
Date | Results | Publications |
---|---|---|
2021-04-17 13:11:00 | LncRNA Sox2ot modulates the progression of thoracic aortic aneurysm by regulating miR-330-5p/Myh11. | 32578852 |
2019-12-07 10:40:00 | Sox2ot forms a physical interaction with a multifunctional transcriptional regulator YY1, which binds several CpG islands in the Sox2 locus in a Sox2ot-dependent manner. | 30038234 |
2019-12-07 10:40:00 | In general, SOX2OT contributed to mitochondrial dysfunction progression via inhibiting SOX2 expression in septic cardiomyopathy, which may provide a new insight for treatment of septic cardiomyopathy. | 31618067 |
2018-11-24 11:21:00 | Data propose that during development Sox2ot expression is mainly restricted to neural cell types and that enhanced Sox2ot transcriptional activity negatively affects Sox2 RNA levels in an allele-specific manner. | 29321583 |
2018-02-12 10:11:00 | During development Sox2ot represses Sox2 in an allele-specific manner | 29321583 |
Type | IDs |
---|---|
Synonymous | B230215L15Rik |
Gene | |
Nucleutide sequences | |
Protein sequencees | |
Others |
UniGene:
Mm.444063
|
{{proteinIndex+1}} | mRNA | Protein | UniprotKB | Description | ||||
---|---|---|---|---|---|---|---|---|
Refseq |
{{protein.nucleotideVersion}}
Ensembl: {{protein.nucleotideEnsembl}} |
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Ensembl: {{protein.proteinEnsembl}} |
{{uniprot}} , |
Definition: {{{protein.definition}}}Transcript Veriant:{{protein.transcriptVeriant}} Status: {{protein.status}} |
||||
Location | {{protein.contigId}} ( {{protein.positionStart}}..{{protein.positionEnd}} , {{protein.orientation}} ) | |||||||
Conserved domain | Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
{{conservedDomain.comments == '' || conservedDomain.comments == null ? "-" : conservedDomain.comments }} |
Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
{{conservedDomain.comments == '' || conservedDomain.comments == null ? "-" : conservedDomain.comments }} |
暂无数据
Pubmed编号 | 文献信息 | 发表日期 | 相关基因 |
---|---|---|---|
32578852 |
LncRNA Sox2ot modulates the progression of thoracic aortic aneurysm by regulating miR-330-5p/Myh11. Biosci Rep Weizhang Xiao , Xing Li , Cheng Ji , Jiahai Shi , Youmin Pan |
2020-07-31 | - |
31618067 |
LncRNA SOX2OT Mediates Mitochondrial Dysfunction in Septic Cardiomyopathy. DNA Cell Biol. Mengfei Chen , Yan Guan , Ao Li , Ying-Zhu Zhao , Ling Zhang , Liang Zhang , Yanxuan Gong |
2019-11-01 | - |
30038234 |
Cell Death Dis Jennifer L Knauss , Nan Miao , Seung-Nam Kim , Yanzhen Nie , Yuelin Shi , Tao Wu , Hugo Borges Pinto , Mary E Donohoe , Tao Sun |
2018-07-23 | - |
29321583 |
Allele-specific repression of Sox2 through the long non-coding RNA Sox2ot. Sci Rep Tobias C Messemaker , Selina M van Leeuwen , Patrick R van den Berg , Anke E J 't Jong , Robert-Jan Palstra , Rob C Hoeben , Stefan Semrau , Harald M M Mikkers |
2018-01-10 | - |
27193103 |
Cell. Mol. Neurobiol. Chao-Peng Li , Shu-Hong Wang , Wen-Qi Wang , Shu-Guang Song , Xiu-Ming Liu |
2017-03-01 | - |
28704421 |
PLoS ONE Valentina Tosetti , Jenny Sassone , Anna L M Ferri , Michela Taiana , Gloria Bedini , Sara Nava , Greta Brenna , Chiara Di Resta , Davide Pareyson , Anna Maria Di Giulio , Stephana Carelli , Eugenio A Parati , Alfredo Gorio |
2017-01-01 | - |
25006803 |
Emerging role of long non-coding RNA SOX2OT in SOX2 regulation in breast cancer. PLoS ONE Marjan E Askarian-Amiri , Vahid Seyfoddin , Chanel E Smart , Jingli Wang , Ji Eun Kim , Herah Hansji , Bruce C Baguley , Graeme J Finlay , Euphemia Y Leung |
2014-01-01 |
Sox2ot,
SOX2-OT
|
24316575 |
The Vertebrate Genome Annotation browser 10 years on. Nucleic Acids Res. Jennifer L Harrow , Charles A Steward , Adam Frankish , James G Gilbert , Jose M Gonzalez , Jane E Loveland , Jonathan Mudge , Dan Sheppard , Mark Thomas , Stephen Trevanion , Laurens G Wilming |
2014-01-01 | - |
23604909 |
Gene-trap mutagenesis using Mol/MSM-1 embryonic stem cells from MSM/Ms mice. Mamm. Genome Mai Nakahara , Hiroki Tateyama , Masatake Araki , Naomi Nakagata , Ken-ichi Yamamura , Kimi Araki |
2013-06-01 |
Rex2,
Cnot6,
Foxp1,
Mta1,
Pop5,
Bmpr1a,
Dnajc5,
Ctbp2,
Celf1,
Mark2,
Sfxn1,
Gli2,
Klf12,
Kpna2,
Alad,
Nedd4,
Pkig,
Plcb4,
Pvt1,
Rbmxl1,
Rbpms,
Rbpj,
Ralbp1,
Rnf2,
Stmn2,
Camkk2,
Etl4,
Hmgcs1,
Daam1,
Tnrc6b,
Tead1,
Tmem11,
Itpk1,
Arl15,
Hmbox1,
Traf3,
Tsix,
Slc25a51,
Tnrc6a,
Tmem161a,
Usp32,
Abcc4,
Pacsin2,
Zfp407,
G3bp1,
Txnl4a,
Sox2ot,
Mreg,
Snhg3,
Zdhhc18,
Txnrd1,
Carhsp1,
Rev1,
Vapb,
Chst12,
Rpl23,
Cyb5b,
Psmd12,
Rnmt,
Setd8,
Rps13,
1110002J07Rik,
2410006H16Rik,
Qrich1,
Wdfy1,
Ten1,
Mier2,
Mutyh,
Ist1,
Fryl,
Rab10os,
Fblim1,
Tti1,
Nln,
Msi2,
Csrnp3,
Sh3bp4
|
24381249 |
Multiple knockout mouse models reveal lincRNAs are required for life and brain development. Elife Martin Sauvageau , Loyal A Goff , Simona Lodato , Boyan Bonev , Abigail F Groff , Chiara Gerhardinger , Diana B Sanchez-Gomez , Ezgi Hacisuleyman , Eric Li , Matthew Spence , Stephen C Liapis , William Mallard , Michael Morse , Mavis R Swerdel , Michael F D'Ecclessis , Jennifer C Moore , Venus Lai , Guochun Gong , George D Yancopoulos , David Frendewey , Manolis Kellis , Ronald P Hart , David M Valenzuela , Paola Arlotta , John L Rinn |
2013-01-01 |
Lncenc1,
Trp53cor1,
LOC102634401,
Haglr,
Halr1,
Mannr,
Gm38509,
Ptgs2os2,
Lncppara,
Cux1,
Cux2,
Eomes,
Slc17a6,
Pou3f3,
Sox2,
Satb2,
Tle4,
Rorb,
Lncpint,
Svet1,
Sox2ot,
Tug1,
Bcl11b,
Pantr1,
Pantr2,
Fendrr,
Crnde,
Eldr,
Kantr,
Hottip,
Celrr,
HOTTIP,
LINC01158,
LINC01159,
KANTR,
ELDR,
TP53COR1,
LINC01157,
LINC-PINT,
FENDRR,
MIRLET7BHG,
HAGLR,
TUG1,
CRNDE
|
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