Shep RNA-Binding Capacity Is Required for Antagonism of gypsy Chromatin Insulator Activity.

G3 (Bethesda)     Dahong Chen , Margarita Brovkina , Leah H Matzat , Elissa P Lei

Proteome-wide dataset supporting the study of ancient metazoan macromolecular complexes.

Data Brief     Sadhna Phanse , Cuihong Wan , Blake Borgeson , Fan Tu , Kevin Drew , Greg Clark , Xuejian Xiong , Olga Kagan , Julian Kwan , Alexandr Bezginov , Kyle Chessman , Swati Pal , Graham Cromar , Ophelia Papoulas , Zuyao Ni , Daniel R Boutz , Snejana Stoilova , Pierre C Havugimana , Xinghua Guo , Ramy H Malty , Mihail Sarov , Jack Greenblatt , Mohan Babu , W Brent Derry , Elisabeth R Tillier , John B Wallingford , John Parkinson , Edward M Marcotte , Andrew Emili

Gene Model Annotations for Drosophila melanogaster: The Rule-Benders.

G3 (Bethesda)     Madeline A Crosby , L Sian Gramates , Gilberto Dos Santos , Beverley B Matthews , Susan E St Pierre , Pinglei Zhou , Andrew J Schroeder , Kathleen Falls , David B Emmert , Susan M Russo , William M Gelbart , FlyBase Consortium

Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data.

G3 (Bethesda)     Beverley B Matthews , Gilberto Dos Santos , Madeline A Crosby , David B Emmert , Susan E St Pierre , L Sian Gramates , Pinglei Zhou , Andrew J Schroeder , Kathleen Falls , Victor Strelets , Susan M Russo , William M Gelbart , FlyBase Consortium

The Release 6 reference sequence of the Drosophila melanogaster genome.

Genome Res.     Roger A Hoskins , Joseph W Carlson , Kenneth H Wan , Soo Park , Ivonne Mendez , Samuel E Galle , Benjamin W Booth , Barret D Pfeiffer , Reed A George , Robert Svirskas , Martin Krzywinski , Jacqueline Schein , Maria Carmela Accardo , Elisabetta Damia , Giovanni Messina , María Méndez-Lago , Beatriz de Pablos , Olga V Demakova , Evgeniya N Andreyeva , Lidiya V Boldyreva , Marco Marra , A Bernardo Carvalho , Patrizio Dimitri , Alfredo Villasante , Igor F Zhimulev , Gerald M Rubin , Gary H Karpen , Susan E Celniker

Genome-wide identification and characterization of tissue-specific RNA editing events in D. melanogaster and their potential role in regulating alternative splicing.

RNA Biol     Alborz Mazloomian , Irmtraud M Meyer

Messenger RNA is a functional component of a chromatin insulator complex.

EMBO Rep     Leah H Matzat , Ryan K Dale , Elissa P Lei

High-fidelity promoter profiling reveals widespread alternative promoter usage and transposon-driven developmental gene expression.

Genome Res.     Philippe Batut , Alexander Dobin , Charles Plessy , Piero Carninci , Thomas R Gingeras

The many landscapes of recombination in Drosophila melanogaster.

PLoS Genet     Josep M Comeron , Ramesh Ratnappan , Samuel Bailin

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.

Brief. Bioinformatics     Pascale Gaudet , Michael S Livstone , Suzanna E Lewis , Paul D Thomas