| Type | Description |
|---|---|
| Definition | putative DNA-binding transcriptional regulator DgoR |
| Date | Results | Publications |
|---|---|---|
| 2019-10-26 11:43:00 | Here, using genetic, biochemical and bioinformatics approaches, the authors present the first detailed molecular and functional insights into the regulation of d-galactonate metabolism in Escherichia coli K-12 by the transcriptional regulator DgoR. | 30455279 |
| Type | IDs |
|---|---|
| Synonymous | ECK3687, b3694, b3695, yidW |
| Gene |
UniProtKB-ID:
DGOR_ECOLI
UniprotKB:
P31460
UniParc:
UPI000000E7A9
EMBL:
L10328,
U00096,
AP009048
EnsemblGenome:
b4479,
BAE77599
KO:
ecj:JW5627,
eco:b4479
|
| Nucleutide sequences |
EMBL-CDS:
AAT48199.1,
AAA62046.1,
BAE77599.1
EnsemblGenome_TRS:
AAT48199,
BAE77599
|
| Protein sequencees |
EnsemblGenome_PRO:
BAE77599,
AAT48199
RefSeq:
YP_026239.1
|
| Others |
UniRef100:
UniRef100_P31460
UniRef90:
UniRef90_P31460
UniRef50:
UniRef50_P31460
|
| {{proteinIndex+1}} | mRNA | Protein | UniprotKB | Description | ||||
|---|---|---|---|---|---|---|---|---|
| Refseq |
{{protein.nucleotideVersion}}
Ensembl: {{protein.nucleotideEnsembl}} |
{{protein.proteinVersion}}
Ensembl: {{protein.proteinEnsembl}} |
{{uniprot}} , |
Definition: {{{protein.definition}}}Transcript Veriant:{{protein.transcriptVeriant}} Status: {{protein.status}} |
||||
| Location | {{protein.contigId}} ( {{protein.positionStart}}..{{protein.positionEnd}} , {{protein.orientation}} ) | |||||||
| Conserved domain | Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
{{conservedDomain.comments == '' || conservedDomain.comments == null ? "-" : conservedDomain.comments }} |
Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
{{conservedDomain.comments == '' || conservedDomain.comments == null ? "-" : conservedDomain.comments }} |
||||
暂无数据
| Pubmed编号 | 文献信息 | 发表日期 | 相关基因 |
|---|---|---|---|
| 30455279 |
J Bacteriol Bhupinder Singh , Garima Arya , Neeladrita Kundu , Akshay Sangwan , Shachikanta Nongthombam , Rachna Chaba |
2019-02-15 | - |
| 29728462 |
Proc. Natl. Acad. Sci. U.S.A. Nathan M Belliveau , Stephanie L Barnes , William T Ireland , Daniel L Jones , Michael J Sweredoski , Annie Moradian , Sonja Hess , Justin B Kinney , Rob Phillips |
2018-05-22 | - |
| 24561554 |
The binary protein-protein interaction landscape of Escherichia coli. Nat. Biotechnol. Seesandra V Rajagopala , Patricia Sikorski , Ashwani Kumar , Roberto Mosca , James Vlasblom , Roland Arnold , Jonathan Franca-Koh , Suman B Pakala , Sadhna Phanse , Arnaud Ceol , Roman Häuser , Gabriella Siszler , Stefan Wuchty , Andrew Emili , Mohan Babu , Patrick Aloy , Rembert Pieper , Peter Uetz |
2014-03-01 | - |
| 16738553 |
Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Mol. Syst. Biol. Koji Hayashi , Naoki Morooka , Yoshihiro Yamamoto , Katsutoshi Fujita , Katsumi Isono , Sunju Choi , Eiichi Ohtsubo , Tomoya Baba , Barry L Wanner , Hirotada Mori , Takashi Horiuchi |
2006-01-01 |
pmrR,
torI,
yaeP,
ykfH,
ykgO,
ylcG,
rzoD,
ybdZ,
cydX,
gnsA,
insA,
ymgF,
ymiA,
yciX,
rzoR,
ynfO,
yniD,
yobH,
yoeB,
yohO,
arnE,
ypeB,
ypfN,
ypjJ,
arfA,
yheV,
ysaB,
sgcB,
yjhX,
ytjA,
yibT,
yicS,
yidD,
yifL,
ghoT,
yjjZ,
mntS,
iroK,
wecF,
yigE,
blr,
yggP,
cpxP,
hdfR,
thiS,
greB,
rtcA,
smf,
ygcU,
ypjK,
hokE,
sslE,
glcF,
glcE,
yhaM,
tdcG,
ytfR,
hokB,
ldrD,
hokA,
ldrA,
ldrB,
ecnA,
ecnB,
yfjD,
yhdP,
yjjV,
cysW,
hokC,
ghxQ,
tatD,
yjdP,
cutC,
nirC,
frlC,
aroK,
gntU,
dgoD,
dgoA,
dgoR,
yigL,
ldrC,
ylbE,
ydbJ,
yeiW,
yehK,
yneM,
ykfM,
ylcI,
yciY,
yncL,
ylcH,
ynhF,
yciZ,
ydgU,
ypfM,
ymgI,
ymgJ,
dinQ
|
| 16397293 |
Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Nucleic Acids Res. Monica Riley , Takashi Abe , Martha B Arnaud , Mary K B Berlyn , Frederick R Blattner , Roy R Chaudhuri , Jeremy D Glasner , Takashi Horiuchi , Ingrid M Keseler , Takehide Kosuge , Hirotada Mori , Nicole T Perna , Guy Plunkett , Kenneth E Rudd , Margrethe H Serres , Gavin H Thomas , Nicholas R Thomson , David Wishart , Barry L Wanner |
2006-01-01 |
pmrR,
yfaS,
torI,
yaeP,
ykfH,
ykgO,
ylcG,
rzoD,
ybdZ,
cydX,
gnsA,
insA,
ymgF,
ymiA,
yciX,
rzoR,
ynfO,
yniD,
yobH,
yoeF,
yoeB,
yohO,
arnE,
ypdJ,
ypeB,
ypfN,
ypjJ,
arfA,
yheV,
ysaB,
sgcB,
yjhX,
ytjA,
yibT,
yicS,
yidD,
yifL,
ghoT,
yjjZ,
mntS,
iroK,
yifN,
wecF,
yigE,
blr,
yggP,
cpxP,
ygaY,
hdfR,
thiS,
yedN,
greB,
rtcA,
smf,
ygcU,
ypjK,
hokE,
sslE,
glcF,
glcE,
glvC,
yhaM,
tdcG,
ytfR,
yehH,
hokB,
ldrD,
hokA,
ldrA,
ldrB,
ecnA,
ecnB,
gapC,
yfjD,
yhdP,
yjjV,
cysW,
hokC,
ghxQ,
tatD,
yjdP,
cutC,
nirC,
frlC,
aroK,
gntU,
yedS,
dgoD,
dgoA,
dgoR,
yigL,
ldrC,
ylbE,
ydbJ,
yeiW,
yehK,
yaiX,
yoeA,
yneM
|
| 15898075 |
Identification of genes affecting lycopene accumulation in Escherichia coli using a shot-gun method. Biotechnol. Bioeng. Min Jung Kang , Young Mi Lee , Sang Hwal Yoon , Jung Heon Kim , So Won Ock , Kyung Hwa Jung , Yong Chul Shin , Jay D Keasling , Seon Won Kim |
2005-09-05 |
dgoR,
phoE,
dxs,
crl,
ariR,
ycgZ,
rpoS,
yidX,
yidA,
dgoK,
yidB,
appY,
ymgA
|
| 15556475 |
Phylogenetic distribution of DNA-binding transcription factors in bacteria and archaea. Comput Biol Chem Ernesto Pérez-Rueda , Julio Collado-Vides , Lorenzo Segovia |
2004-12-01 |
dgoR,
rhmR,
sfsA,
ybhD,
yjjJ,
ykgA,
ecpR,
yagI,
yaiW,
rutR,
ybaO,
ydiP,
ybcM,
ydhB,
ybdO,
ybeF,
yahB,
ogrK,
ybhN,
perR,
ybiH,
ybjJ,
rcdA,
pspC,
ycaN,
rclR,
mltD,
bluR,
mqsA,
marR,
yciT,
ycjW,
puuR,
racR,
pgrR,
ydeM,
ydcN,
hicB,
ydcR,
mcbR,
yneJ,
rspR,
cspB,
ynfL,
nemR,
ygeH,
ydjF,
dmlR,
cspC,
yebK,
yedW,
yeeY,
murR,
yeaM,
yegW,
yeiE,
sgcR,
ypdC,
yfeC,
yggD,
yfeD,
yfeR,
yaiV,
eutR,
yfhH,
glrR,
yfiE,
ygaV,
hycA,
ygbI,
yfjR,
ygeV,
yqeI,
ygeK,
ygeR,
ygfI,
ycfQ,
ydfK,
yqhC,
yafC,
ttdR,
yhaJ,
yghO,
aaeR,
yheO,
frlR,
ibaG,
dctR,
yhjC,
yhjB,
yiaU,
yidF,
yidL,
yidP,
yidZ,
yieP,
yihL,
yihW,
frvR
|
| 11756427 |
J Biol Chem Sébastien Rigali , Adeline Derouaux , Fabrizio Giannotta , Jean Dusart |
2002-04-12 | - |
| 10734204 |
The repertoire of DNA-binding transcriptional regulators in Escherichia coli K-12. Nucleic Acids Res. E Pérez-Rueda , J Collado-Vides |
2000-04-15 | - |
| 9278503 |
The complete genome sequence of Escherichia coli K-12. Science F R Blattner , G Plunkett , C A Bloch , N T Perna , V Burland , M Riley , J Collado-Vides , J D Glasner , C K Rode , G F Mayhew , J Gregor , N W Davis , H A Kirkpatrick , M A Goeden , D J Rose , B Mau , Y Shao |
1997-09-05 | - |
| 排名 | 科研单位 | 文献 |
|---|---|---|
| {{affIndex+1}} |
{{aff.value}} |
{{aff.size}} |
目前还没有研究热点单位
| 排名 | 研究人员 | 文献 |
|---|---|---|
| {{authorIndex+1}} |
{{author.value}} |
{{author.size}} |
目前还没有研究热点人员