| Type | Description |
|---|---|
| Definition | cancer/testis antigen family 47 member A11 |
| Date | Results | Publications |
|---|---|---|
| 2010-01-21 00:00:00 | CT47 expression was found in approximately 15% of lung cancer and esophageal cancer specimens, but not in colorectal cancer or breast cancer. The putative CT47 protein consists of 288 amino acid, with a C-terminus rich in alanine and glutamic acid. | 16382448 |
| Type | IDs |
|---|---|
| Synonymous | CT47.11 |
| Gene |
UniProtKB-ID:
CT47A_HUMAN
UniprotKB:
Q5JQC4
UniParc:
UPI000013EEB5
EMBL:
AC008162,
BC029540,
AL670379
Ensembl:
ENSG00000226685,
ENSG00000224089,
ENSG00000236126,
ENSG00000226600,
ENSG00000230347,
ENSG00000226023,
ENSG00000288273,
ENSG00000226929,
ENSG00000228517,
ENSG00000288363,
ENSG00000242362,
ENSG00000236371,
ENSG00000288477,
ENSG00000230594,
ENSG00000237957
KO:
hsa:728075,
hsa:653282,
hsa:728090,
hsa:255313,
hsa:728049,
hsa:728072,
hsa:728042,
hsa:728082,
hsa:728096,
hsa:728036,
hsa:728062,
hsa:100507170
|
| Nucleutide sequences |
EMBL-CDS:
AAH29540.1
Ensembl_TRS:
ENST00000457020,
ENST00000434883,
ENST00000457977,
ENST00000417256,
ENST00000430448,
ENST00000441330,
ENST00000419982,
ENST00000458218,
ENST00000433030,
ENST00000672380,
ENST00000439466,
ENST00000673456,
ENST00000672229,
ENST00000415858,
ENST00000419194
|
| Protein sequencees |
Ensembl_PRO:
ENSP00000410400,
ENSP00000500110,
ENSP00000393315,
ENSP00000398559,
ENSP00000500004,
ENSP00000400046,
ENSP00000392283,
ENSP00000414253,
ENSP00000399711,
ENSP00000408204,
ENSP00000411909,
ENSP00000391318,
ENSP00000500057,
ENSP00000389513,
ENSP00000390070
RefSeq:
NP_775842.2,
XP_011529621.1
|
| Others |
UniRef100:
UniRef100_Q5JQC4
UniRef90:
UniRef90_Q5JQC4
UniRef50:
UniRef50_Q5JQC4
UniGene:
Hs.522775,
Hs.715076
CCDS:
CCDS35383.1,
CCDS35391.1,
CCDS35384.1,
CCDS35389.1,
CCDS56607.1,
CCDS35390.1,
CCDS35385.1,
CCDS35382.1,
CCDS35388.1,
CCDS35387.1,
CCDS35381.1,
CCDS35386.1
|
| {{proteinIndex+1}} | mRNA | Protein | UniprotKB | Description | ||||
|---|---|---|---|---|---|---|---|---|
| Refseq |
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Ensembl: {{protein.nucleotideEnsembl}} |
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| Location | {{protein.contigId}} ( {{protein.positionStart}}..{{protein.positionEnd}} , {{protein.orientation}} ) | |||||||
| Conserved domain | Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
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