Tf2-1 - retrotransposable element-BMKCloudï½ç¾è¿å®¢äº

2543673 Tf2-1

基因描述

Type	Description
Definition	retrotransposable element

研究结论

Date	Results	Publications
2017-06-03 10:15:00	The results suggest that Abp1 prevents pervasive RNAPII transcription of repetitive DNA elements (ie, Tf2 and rDNA repeats) from internal cryptic sites.	27345571

名称对应

Type	IDs
Gene	UniProtKB-ID: TF24_SCHPO, TF21_SCHPO, TF29_SCHPO, TF22_SCHPO UniprotKB: P0CT37, P0CT34, P0CT40, P0CT35 UniParc: UPI0000135298 EMBL: CU329671, CU329670 EnsemblGenome: SPBC9B6.02c, SPAC26A3.13c, SPAC9.04, SPAC167.08 KO: spo:SPAC167.08, spo:SPBC9B6.02c, spo:SPAC26A3.13c, spo:SPAC9.04
Nucleutide sequences	EMBL-CDS: CAA93236.1, CAB57422.1, CAB42363.1, CAB58169.1 Gene_ORFName: SPAC26A3.13c, SPAC9.04, SPBC9B6.02c, SPAC1705.01c, SPAC167.08 EnsemblGenome_TRS: SPAC9.04.1, SPAC26A3.13c.1, SPBC9B6.02c.1, SPAC167.08.1, SPAC9.04.1, SPAC26A3.13c.1, SPAC167.08.1, SPBC9B6.02c.1, SPAC167.08.1, SPBC9B6.02c.1, SPAC26A3.13c.1, SPAC9.04.1, SPAC9.04.1, SPBC9B6.02c.1, SPAC167.08.1, SPAC26A3.13c.1
Protein sequencees	EnsemblGenome_PRO: SPAC9.04.1:pep, SPBC9B6.02c.1:pep, SPAC26A3.13c.1:pep, SPAC167.08.1:pep, SPAC9.04.1:pep, SPAC26A3.13c.1:pep, SPBC9B6.02c.1:pep, SPAC167.08.1:pep, SPAC167.08.1:pep, SPBC9B6.02c.1:pep, SPAC26A3.13c.1:pep, SPAC9.04.1:pep, SPAC167.08.1:pep, SPAC26A3.13c.1:pep, SPBC9B6.02c.1:pep, SPAC9.04.1:pep RefSeq: NP_593347.1
Others	UniRef100: UniRef100_P0CT34 UniRef90: UniRef90_Q9UR07 UniRef50: UniRef50_Q9UR07

全选

{{proteinIndex+1}}	mRNA	Protein	UniprotKB	Description
Refseq	{{protein.nucleotideVersion}} Ensembl: {{protein.nucleotideEnsembl}}	{{protein.proteinVersion}} Ensembl: {{protein.proteinEnsembl}}	{{uniprot}}	Definition: {{{protein.definition}}} Transcript Veriant:{{protein.transcriptVeriant}} Status: {{protein.status}}
Location	( {{protein.positionStart}}..{{protein.positionEnd}} )
Conserved domain	Region: {{conservedDomain.region == '' \|\| conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' \|\| conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' \|\| conservedDomain.family == null ? "-": conservedDomain.family}} CDD:	{{conservedDomain.comments == '' \|\| conservedDomain.comments == null ? "-" : conservedDomain.comments }}	Region: {{conservedDomain.region == '' \|\| conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' \|\| conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' \|\| conservedDomain.family == null ? "-": conservedDomain.family}} CDD:	{{conservedDomain.comments == '' \|\| conservedDomain.comments == null ? "-" : conservedDomain.comments }}

mRNA

Protein

UniprotKB

Description

Refseq

Ensembl: {{protein.nucleotideEnsembl}}

Ensembl: {{protein.proteinEnsembl}}

Definition: {{{protein.definition}}}

Transcript Veriant:{{protein.transcriptVeriant}}

Status: {{protein.status}}

Location

( {{protein.positionStart}}..{{protein.positionEnd}} )

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全选

Pubmed编号	文献信息	发表日期	相关基因
27345571	The fission yeast CENP-B protein Abp1 prevents pervasive transcription of repetitive DNA elements. Biochim. Biophys. Acta Anne Daulny , Eva MejÃa-RamÃrez , Oscar Reina , Jesus Rosado-Lugo , Lorena Aguilar-Arnal , Herbert Auer , Mikel Zaratiegui , Fernando Azorin	2016-10-01	-
11859360	The genome sequence of Schizosaccharomyces pombe. Nature V Wood , R Gwilliam , M-A Rajandream , M Lyne , R Lyne , A Stewart , J Sgouros , N Peat , J Hayles , S Baker , D Basham , S Bowman , K Brooks , D Brown , S Brown , T Chillingworth , C Churcher , M Collins , R Connor , A Cronin , P Davis , T Feltwell , A Fraser , S Gentles , A Goble , N Hamlin , D Harris , J Hidalgo , G Hodgson , S Holroyd , T Hornsby , S Howarth , E J Huckle , S Hunt , K Jagels , K James , L Jones , M Jones , S Leather , S McDonald , J McLean , P Mooney , S Moule , K Mungall , L Murphy , D Niblett , C Odell , K Oliver , S O'Neil , D Pearson , M A Quail , E Rabbinowitsch , K Rutherford , S Rutter , D Saunders , K Seeger , S Sharp , J Skelton , M Simmonds , R Squares , S Squares , K Stevens , K Taylor , R G Taylor , A Tivey , S Walsh , T Warren , S Whitehead , J Woodward , G Volckaert , R Aert , J Robben , B Grymonprez , I Weltjens , E Vanstreels , M Rieger , M SchÃ¤fer , S MÃ¼ller-Auer , C Gabel , M Fuchs , A DÃ¼sterhÃ¶ft , C Fritzc , E Holzer , D Moestl , H Hilbert , K Borzym , I Langer , A Beck , H Lehrach , R Reinhardt , T M Pohl , P Eger , W Zimmermann , H Wedler , R Wambutt , B Purnelle , A Goffeau , E Cadieu , S DrÃ©ano , S Gloux , V Lelaure , S Mottier , F Galibert , S J Aves , Z Xiang , C Hunt , K Moore , S M Hurst , M Lucas , M Rochet , C Gaillardin , V A Tallada , A Garzon , G Thode , R R Daga , L Cruzado , J Jimenez , M SÃ¡nchez , F del Rey , J Benito , A DomÃnguez , J L Revuelta , S Moreno , J Armstrong , S L Forsburg , L Cerutti , T Lowe , W R McCombie , I Paulsen , J Potashkin , G V Shpakovski , D Ussery , B G Barrell , P Nurse , L Cerrutti	2002-02-21	SPCC1235.18, SPCC18.20, SPCC188.14, SPCC794.16, new22, tam14, cmc2, SPCC1235.17, SPCC417.16, SPCPB16A4.07, SPCC663.18, SPCC1672.14, SPCC1259.16, ost5, new25, tam11, SPBC336.16, SPBC18E5.09c, tam10, ymr31, tam8, ksh1, tam13, new15, SPBPB21E7.10, SPBPB21E7.11, SPBC1685.17, SPBC36.13, SPBC713.13, SPBP35G2.17, cox7, SPBC16E9.20, new16, SPBP8B7.32, new14, SPBC3E7.17, SPBC2A9.14, new19, new18, tam12, cox20, SPBC651.07, SPBC32H8.15, SPBC21B10.15, SPBC19G7.19, SPBC30B4.09, SPBC32F12.17, new17, tam9, new20, SPBP23A10.17, tam7, SPBC13G1.16, SPAC1399.06, tam5, SPAC17A5.19, SPAC1B2.06, tam3, SPAC11D3.19, SPAC25B8.20, new8, SPAC9G1.14, new4, SPAC4H3.17, SPAC8E11.12, SPAC959.06c, SPAC977.18, mzt1, SPACUNK4.20, SPAPB15E9.06, SPAC1093.07, SPAC1834.13, cmc4, SPAC2H10.04, new12, new13, SPAC110.05, SPAC922.09, tam1, SPAC343.21, SPAPJ695.02, spd2, fmc1, SPAC1071.13, new9, new11, new10, new2, new1, coa2, rsa3, SPAC959.11, tam6, SPAC29A4.22, SPAC4H3.16, prl65, sum3, ers1, SPCC126.01c

Pubmed编号

文献信息

发表日期

相关基因

27345571

The fission yeast CENP-B protein Abp1 prevents pervasive transcription of repetitive DNA elements.

Biochim. Biophys. Acta Anne Daulny , Eva MejÃa-RamÃrez , Oscar Reina , Jesus Rosado-Lugo , Lorena Aguilar-Arnal , Herbert Auer , Mikel Zaratiegui , Fernando Azorin

2016-10-01

11859360

The genome sequence of Schizosaccharomyces pombe.

Nature V Wood , R Gwilliam , M-A Rajandream , M Lyne , R Lyne , A Stewart , J Sgouros , N Peat , J Hayles , S Baker , D Basham , S Bowman , K Brooks , D Brown , S Brown , T Chillingworth , C Churcher , M Collins , R Connor , A Cronin , P Davis , T Feltwell , A Fraser , S Gentles , A Goble , N Hamlin , D Harris , J Hidalgo , G Hodgson , S Holroyd , T Hornsby , S Howarth , E J Huckle , S Hunt , K Jagels , K James , L Jones , M Jones , S Leather , S McDonald , J McLean , P Mooney , S Moule , K Mungall , L Murphy , D Niblett , C Odell , K Oliver , S O'Neil , D Pearson , M A Quail , E Rabbinowitsch , K Rutherford , S Rutter , D Saunders , K Seeger , S Sharp , J Skelton , M Simmonds , R Squares , S Squares , K Stevens , K Taylor , R G Taylor , A Tivey , S Walsh , T Warren , S Whitehead , J Woodward , G Volckaert , R Aert , J Robben , B Grymonprez , I Weltjens , E Vanstreels , M Rieger , M SchÃ¤fer , S MÃ¼ller-Auer , C Gabel , M Fuchs , A DÃ¼sterhÃ¶ft , C Fritzc , E Holzer , D Moestl , H Hilbert , K Borzym , I Langer , A Beck , H Lehrach , R Reinhardt , T M Pohl , P Eger , W Zimmermann , H Wedler , R Wambutt , B Purnelle , A Goffeau , E Cadieu , S DrÃ©ano , S Gloux , V Lelaure , S Mottier , F Galibert , S J Aves , Z Xiang , C Hunt , K Moore , S M Hurst , M Lucas , M Rochet , C Gaillardin , V A Tallada , A Garzon , G Thode , R R Daga , L Cruzado , J Jimenez , M SÃ¡nchez , F del Rey , J Benito , A DomÃnguez , J L Revuelta , S Moreno , J Armstrong , S L Forsburg , L Cerutti , T Lowe , W R McCombie , I Paulsen , J Potashkin , G V Shpakovski , D Ussery , B G Barrell , P Nurse , L Cerrutti

2002-02-21

SPCC1235.18, SPCC18.20, SPCC188.14, SPCC794.16, new22, tam14, cmc2, SPCC1235.17, SPCC417.16, SPCPB16A4.07, SPCC663.18, SPCC1672.14, SPCC1259.16, ost5, new25, tam11, SPBC336.16, SPBC18E5.09c, tam10, ymr31, tam8, ksh1, tam13, new15, SPBPB21E7.10, SPBPB21E7.11, SPBC1685.17, SPBC36.13, SPBC713.13, SPBP35G2.17, cox7, SPBC16E9.20, new16, SPBP8B7.32, new14, SPBC3E7.17, SPBC2A9.14, new19, new18, tam12, cox20, SPBC651.07, SPBC32H8.15, SPBC21B10.15, SPBC19G7.19, SPBC30B4.09, SPBC32F12.17, new17, tam9, new20, SPBP23A10.17, tam7, SPBC13G1.16, SPAC1399.06, tam5, SPAC17A5.19, SPAC1B2.06, tam3, SPAC11D3.19, SPAC25B8.20, new8, SPAC9G1.14, new4, SPAC4H3.17, SPAC8E11.12, SPAC959.06c, SPAC977.18, mzt1, SPACUNK4.20, SPAPB15E9.06, SPAC1093.07, SPAC1834.13, cmc4, SPAC2H10.04, new12, new13, SPAC110.05, SPAC922.09, tam1, SPAC343.21, SPAPJ695.02, spd2, fmc1, SPAC1071.13, new9, new11, new10, new2, new1, coa2, rsa3, SPAC959.11, tam6, SPAC29A4.22, SPAC4H3.16, prl65, sum3, ers1, SPCC126.01c

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