A reference map of the human binary protein interactome.

Nature     Katja Luck , Dae-Kyum Kim , Luke Lambourne , Kerstin Spirohn , Bridget E Begg , Wenting Bian , Ruth Brignall , Tiziana Cafarelli , Francisco J Campos-Laborie , Benoit Charloteaux , Dongsic Choi , Atina G Coté , Meaghan Daley , Steven Deimling , Alice Desbuleux , Amélie Dricot , Marinella Gebbia , Madeleine F Hardy , Nishka Kishore , Jennifer J Knapp , István A Kovács , Irma Lemmens , Miles W Mee , Joseph C Mellor , Carl Pollis , Carles Pons , Aaron D Richardson , Sadie Schlabach , Bridget Teeking , Anupama Yadav , Mariana Babor , Dawit Balcha , Omer Basha , Christian Bowman-Colin , Suet-Feung Chin , Soon Gang Choi , Claudia Colabella , Georges Coppin , Cassandra D'Amata , David De Ridder , Steffi De Rouck , Miquel Duran-Frigola , Hanane Ennajdaoui , Florian Goebels , Liana Goehring , Anjali Gopal , Ghazal Haddad , Elodie Hatchi , Mohamed Helmy , Yves Jacob , Yoseph Kassa , Serena Landini , Roujia Li , Natascha van Lieshout , Andrew MacWilliams , Dylan Markey , Joseph N Paulson , Sudharshan Rangarajan , John Rasla , Ashyad Rayhan , Thomas Rolland , Adriana San-Miguel , Yun Shen , Dayag Sheykhkarimli , Gloria M Sheynkman , Eyal Simonovsky , Murat Taşan , Alexander Tejeda , Vincent Tropepe , Jean-Claude Twizere , Yang Wang , Robert J Weatheritt , Jochen Weile , Yu Xia , Xinping Yang , Esti Yeger-Lotem , Quan Zhong , Patrick Aloy , Gary D Bader , Javier De Las Rivas , Suzanne Gaudet , Tong Hao , Janusz Rak , Jan Tavernier , David E Hill , Marc Vidal , Frederick P Roth , Michael A Calderwood

rec-YnH enables simultaneous many-by-many detection of direct protein-protein and protein-RNA interactions.

Nat Commun     Jae-Seong Yang , Mireia Garriga-Canut , Nele Link , Carlo Carolis , Katrina Broadbent , Violeta Beltran-Sastre , Luis Serrano , Sebastian P Maurer

Architecture of the human interactome defines protein communities and disease networks.

Nature     Edward L Huttlin , Raphael J Bruckner , Joao A Paulo , Joe R Cannon , Lily Ting , Kurt Baltier , Greg Colby , Fana Gebreab , Melanie P Gygi , Hannah Parzen , John Szpyt , Stanley Tam , Gabriela Zarraga , Laura Pontano-Vaites , Sharan Swarup , Anne E White , Devin K Schweppe , Ramin Rad , Brian K Erickson , Robert A Obar , K G Guruharsha , Kejie Li , Spyros Artavanis-Tsakonas , Steven P Gygi , J Wade Harper

Retromer Ensures the Degradation of Autophagic Cargo by Maintaining Lysosome Function in Drosophila.

Traffic     Tamás Maruzs , Péter Lőrincz , Zsuzsanna Szatmári , Szilvia Széplaki , Zoltán Sándor , Zsolt Lakatos , Gina Puska , Gábor Juhász , Miklós Sass

A proteome-scale map of the human interactome network.

Cell     Thomas Rolland , Murat Taşan , Benoit Charloteaux , Samuel J Pevzner , Quan Zhong , Nidhi Sahni , Song Yi , Irma Lemmens , Celia Fontanillo , Roberto Mosca , Atanas Kamburov , Susan D Ghiassian , Xinping Yang , Lila Ghamsari , Dawit Balcha , Bridget E Begg , Pascal Braun , Marc Brehme , Martin P Broly , Anne-Ruxandra Carvunis , Dan Convery-Zupan , Roser Corominas , Jasmin Coulombe-Huntington , Elizabeth Dann , Matija Dreze , Amélie Dricot , Changyu Fan , Eric Franzosa , Fana Gebreab , Bryan J Gutierrez , Madeleine F Hardy , Mike Jin , Shuli Kang , Ruth Kiros , Guan Ning Lin , Katja Luck , Andrew MacWilliams , Jörg Menche , Ryan R Murray , Alexandre Palagi , Matthew M Poulin , Xavier Rambout , John Rasla , Patrick Reichert , Viviana Romero , Elien Ruyssinck , Julie M Sahalie , Annemarie Scholz , Akash A Shah , Amitabh Sharma , Yun Shen , Kerstin Spirohn , Stanley Tam , Alexander O Tejeda , Shelly A Trigg , Jean-Claude Twizere , Kerwin Vega , Jennifer Walsh , Michael E Cusick , Yu Xia , Albert-László Barabási , Lilia M Iakoucheva , Patrick Aloy , Javier De Las Rivas , Jan Tavernier , Michael A Calderwood , David E Hill , Tong Hao , Frederick P Roth , Marc Vidal

Large-scale genotyping identifies 41 new loci associated with breast cancer risk.

Nat Genet     Kyriaki Michailidou , Per Hall , Anna Gonzalez-Neira , Maya Ghoussaini , Joe Dennis , Roger L Milne , Marjanka K Schmidt , Jenny Chang-Claude , Stig E Bojesen , Manjeet K Bolla , Qin Wang , Ed Dicks , Andrew Lee , Clare Turnbull , Nazneen Rahman , Breast and Ovarian Cancer Susceptibility Collaboration , Olivia Fletcher , Julian Peto , Lorna Gibson , Isabel Dos Santos Silva , Heli Nevanlinna , Taru A Muranen , Kristiina Aittomäki , Carl Blomqvist , Kamila Czene , Astrid Irwanto , Jianjun Liu , Quinten Waisfisz , Hanne Meijers-Heijboer , Muriel Adank , Hereditary Breast and Ovarian Cancer Research Group Netherlands (HEBON) , Rob B van der Luijt , Rebecca Hein , Norbert Dahmen , Lars Beckman , Alfons Meindl , Rita K Schmutzler , Bertram Müller-Myhsok , Peter Lichtner , John L Hopper , Melissa C Southey , Enes Makalic , Daniel F Schmidt , Andre G Uitterlinden , Albert Hofman , David J Hunter , Stephen J Chanock , Daniel Vincent , François Bacot , Daniel C Tessier , Sander Canisius , Lodewyk F A Wessels , Christopher A Haiman , Mitul Shah , Robert Luben , Judith Brown , Craig Luccarini , Nils Schoof , Keith Humphreys , Jingmei Li , Børge G Nordestgaard , Sune F Nielsen , Henrik Flyger , Fergus J Couch , Xianshu Wang , Celine Vachon , Kristen N Stevens , Diether Lambrechts , Matthieu Moisse , Robert Paridaens , Marie-Rose Christiaens , Anja Rudolph , Stefan Nickels , Dieter Flesch-Janys , Nichola Johnson , Zoe Aitken , Kirsimari Aaltonen , Tuomas Heikkinen , Annegien Broeks , Laura J Van't Veer , C Ellen van der Schoot , Pascal Guénel , Thérèse Truong , Pierre Laurent-Puig , Florence Menegaux , Frederik Marme , Andreas Schneeweiss , Christof Sohn , Barbara Burwinkel , M Pilar Zamora , Jose Ignacio Arias Perez , Guillermo Pita , M Rosario Alonso , Angela Cox , Ian W Brock , Simon S Cross , Malcolm W R Reed , Elinor J Sawyer , Ian Tomlinson , Michael J Kerin , Nicola Miller , Brian E Henderson , Fredrick Schumacher , Loic Le Marchand , Irene L Andrulis , Julia A Knight , Gord Glendon , Anna Marie Mulligan , kConFab Investigators , Australian Ovarian Cancer Study Group , Annika Lindblom , Sara Margolin , Maartje J Hooning , Antoinette Hollestelle , Ans M W van den Ouweland , Agnes Jager , Quang M Bui , Jennifer Stone , Gillian S Dite , Carmel Apicella , Helen Tsimiklis , Graham G Giles , Gianluca Severi , Laura Baglietto , Peter A Fasching , Lothar Haeberle , Arif B Ekici , Matthias W Beckmann , Hermann Brenner , Heiko Müller , Volker Arndt , Christa Stegmaier , Anthony Swerdlow , Alan Ashworth , Nick Orr , Michael Jones , Jonine Figueroa , Jolanta Lissowska , Louise Brinton , Mark S Goldberg , France Labrèche , Martine Dumont , Robert Winqvist , Katri Pylkäs , Arja Jukkola-Vuorinen , Mervi Grip , Hiltrud Brauch , Ute Hamann , Thomas Brüning , GENICA (Gene Environment Interaction and Breast Cancer in Germany) Network , Paolo Radice , Paolo Peterlongo , Siranoush Manoukian , Bernardo Bonanni , Peter Devilee , Rob A E M Tollenaar , Caroline Seynaeve , Christi J van Asperen , Anna Jakubowska , Jan Lubinski , Katarzyna Jaworska , Katarzyna Durda , Arto Mannermaa , Vesa Kataja , Veli-Matti Kosma , Jaana M Hartikainen , Natalia V Bogdanova , Natalia N Antonenkova , Thilo Dörk , Vessela N Kristensen , Hoda Anton-Culver , Susan Slager , Amanda E Toland , Stephen Edge , Florentia Fostira , Daehee Kang , Keun-Young Yoo , Dong-Young Noh , Keitaro Matsuo , Hidemi Ito , Hiroji Iwata , Aiko Sueta , Anna H Wu , Chiu-Chen Tseng , David Van Den Berg , Daniel O Stram , Xiao-Ou Shu , Wei Lu , Yu-Tang Gao , Hui Cai , Soo Hwang Teo , Cheng Har Yip , Sze Yee Phuah , Belinda K Cornes , Mikael Hartman , Hui Miao , Wei Yen Lim , Jen-Hwei Sng , Kenneth Muir , Artitaya Lophatananon , Sarah Stewart-Brown , Pornthep Siriwanarangsan , Chen-Yang Shen , Chia-Ni Hsiung , Pei-Ei Wu , Shian-Ling Ding , Suleeporn Sangrajrang , Valerie Gaborieau , Paul Brennan , James McKay , William J Blot , Lisa B Signorello , Qiuyin Cai , Wei Zheng , Sandra Deming-Halverson , Martha Shrubsole , Jirong Long , Jacques Simard , Montse Garcia-Closas , Paul D P Pharoah , Georgia Chenevix-Trench , Alison M Dunning , Javier Benitez , Douglas F Easton

Host-microbe interactions have shaped the genetic architecture of inflammatory bowel disease.

Nature     Luke Jostins , Stephan Ripke , Rinse K Weersma , Richard H Duerr , Dermot P McGovern , Ken Y Hui , James C Lee , L Philip Schumm , Yashoda Sharma , Carl A Anderson , Jonah Essers , Mitja Mitrovic , Kaida Ning , Isabelle Cleynen , Emilie Theatre , Sarah L Spain , Soumya Raychaudhuri , Philippe Goyette , Zhi Wei , Clara Abraham , Jean-Paul Achkar , Tariq Ahmad , Leila Amininejad , Ashwin N Ananthakrishnan , Vibeke Andersen , Jane M Andrews , Leonard Baidoo , Tobias Balschun , Peter A Bampton , Alain Bitton , Gabrielle Boucher , Stephan Brand , Carsten Büning , Ariella Cohain , Sven Cichon , Mauro D'Amato , Dirk De Jong , Kathy L Devaney , Marla Dubinsky , Cathryn Edwards , David Ellinghaus , Lynnette R Ferguson , Denis Franchimont , Karin Fransen , Richard Gearry , Michel Georges , Christian Gieger , Jürgen Glas , Talin Haritunians , Ailsa Hart , Chris Hawkey , Matija Hedl , Xinli Hu , Tom H Karlsen , Limas Kupcinskas , Subra Kugathasan , Anna Latiano , Debby Laukens , Ian C Lawrance , Charlie W Lees , Edouard Louis , Gillian Mahy , John Mansfield , Angharad R Morgan , Craig Mowat , William Newman , Orazio Palmieri , Cyriel Y Ponsioen , Uros Potocnik , Natalie J Prescott , Miguel Regueiro , Jerome I Rotter , Richard K Russell , Jeremy D Sanderson , Miquel Sans , Jack Satsangi , Stefan Schreiber , Lisa A Simms , Jurgita Sventoraityte , Stephan R Targan , Kent D Taylor , Mark Tremelling , Hein W Verspaget , Martine De Vos , Cisca Wijmenga , David C Wilson , Juliane Winkelmann , Ramnik J Xavier , Sebastian Zeissig , Bin Zhang , Clarence K Zhang , Hongyu Zhao , International IBD Genetics Consortium (IIBDGC) , Mark S Silverberg , Vito Annese , Hakon Hakonarson , Steven R Brant , Graham Radford-Smith , Christopher G Mathew , John D Rioux , Eric E Schadt , Mark J Daly , Andre Franke , Miles Parkes , Severine Vermeire , Jeffrey C Barrett , Judy H Cho

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.

Brief. Bioinformatics     Pascale Gaudet , Michael S Livstone , Suzanna E Lewis , Paul D Thomas

Next-generation sequencing to generate interactome datasets.

Nat Methods     Haiyuan Yu , Leah Tardivo , Stanley Tam , Evan Weiner , Fana Gebreab , Changyu Fan , Nenad Svrzikapa , Tomoko Hirozane-Kishikawa , Edward Rietman , Xinping Yang , Julie Sahalie , Kourosh Salehi-Ashtiani , Tong Hao , Michael E Cusick , David E Hill , Frederick P Roth , Pascal Braun , Marc Vidal

hORFeome v3.1: a resource of human open reading frames representing over 10,000 human genes.

Genomics     Philippe Lamesch , Ning Li , Stuart Milstein , Changyu Fan , Tong Hao , Gabor Szabo , Zhenjun Hu , Kavitha Venkatesan , Graeme Bethel , Paul Martin , Jane Rogers , Stephanie Lawlor , Stuart McLaren , Amélie Dricot , Heather Borick , Michael E Cusick , Jean Vandenhaute , Ian Dunham , David E Hill , Marc Vidal