| Type | Description |
|---|---|
| Definition | Polyadenylation and cleavage factor homolog 11 |
| Type | IDs |
|---|---|
| Gene |
UniProtKB-ID:
PCF11_CAEEL
UniprotKB:
Q09345
UniParc:
UPI000013C010
EMBL:
FO080694
EnsemblGenome:
WBGene00020092
KO:
cel:CELE_R144.2
|
| Nucleutide sequences |
EMBL-CDS:
CCD65870.1
Gene_ORFName:
R144.2
EnsemblGenome_TRS:
R144.2a.1,
R144.2a.2
|
| Protein sequencees |
EnsemblGenome_PRO:
R144.2a.1,
R144.2a.2
RefSeq:
NP_498068.1,
NP_001367577.1
|
| Others |
UniRef100:
UniRef100_Q09345
UniRef90:
UniRef90_Q09345
UniRef50:
UniRef50_Q09345
UniGene:
Cel.6171
|
| {{proteinIndex+1}} | mRNA | Protein | UniprotKB | Description | ||||
|---|---|---|---|---|---|---|---|---|
| Refseq |
{{protein.nucleotideVersion}}
Ensembl: {{protein.nucleotideEnsembl}} |
{{protein.proteinVersion}}
Ensembl: {{protein.proteinEnsembl}} |
{{uniprot}} , |
Definition: {{{protein.definition}}}Transcript Veriant:{{protein.transcriptVeriant}} Status: {{protein.status}} |
||||
| Location | {{protein.contigId}} ( {{protein.positionStart}}..{{protein.positionEnd}} , {{protein.orientation}} ) | |||||||
| Conserved domain | Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
{{conservedDomain.comments == '' || conservedDomain.comments == null ? "-" : conservedDomain.comments }} |
Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
{{conservedDomain.comments == '' || conservedDomain.comments == null ? "-" : conservedDomain.comments }} |
||||
暂无数据
| Pubmed编号 | 文献信息 | 发表日期 | 相关基因 |
|---|---|---|---|
| 31308550 |
EPIC: software toolkit for elution profile-based inference of protein complexes. Nat Methods Lucas ZhongMing Hu , Florian Goebels , June H Tan , Eric Wolf , Uros Kuzmanov , Cuihong Wan , Sadhna Phanse , Changjiang Xu , Mike Schertzberg , Andrew G Fraser , Gary D Bader , Andrew Emili |
2019-08-01 | - |
| 23549480 |
SH3 interactome conserves general function over specific form. Mol Syst Biol Xiaofeng Xin , David Gfeller , Jackie Cheng , Raffi Tonikian , Lin Sun , Ailan Guo , Lianet Lopez , Alevtina Pavlenco , Adenrele Akintobi , Yingnan Zhang , Jean-François Rual , Bridget Currell , Somasekar Seshagiri , Tong Hao , Xinping Yang , Yun A Shen , Kourosh Salehi-Ashtiani , Jingjing Li , Aaron T Cheng , Dryden Bouamalay , Adrien Lugari , David E Hill , Mark L Grimes , David G Drubin , Barth D Grant , Marc Vidal , Charles Boone , Sachdev S Sidhu , Gary D Bader |
2013-01-01 | - |
| 21873635 |
Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief. Bioinformatics Pascale Gaudet , Michael S Livstone , Suzanna E Lewis , Paul D Thomas |
2011-09-01 | - |
| 19447967 |
Shifted Transversal Design smart-pooling for high coverage interactome mapping. Genome Res. Xiaofeng Xin , Jean-François Rual , Tomoko Hirozane-Kishikawa , David E Hill , Marc Vidal , Charles Boone , Nicolas Thierry-Mieg |
2009-07-01 |
lin-65,
F23C8.8,
sop-3,
unc-11,
ceh-17,
M04F3.5,
C06A5.8,
lin-10,
C17E4.10,
rsy-1,
abu-11,
T02H6.5,
ZK1240.1,
ubc-15,
dhs-5,
ifb-1,
ehs-1,
fkh-8,
szy-4,
toe-2,
mig-5,
K10H10.4,
Y55B1BR.2,
pat-12,
F23H11.4,
exc-6,
F34D10.4,
abi-1,
mdt-15,
T04C9.1,
C05D10.4,
lim-8,
cyk-1,
F08F8.9,
mig-10,
nhl-1,
rde-4,
athp-1,
T12D8.9,
Y41D4A.5,
snn-1,
M57.1,
C06G3.6,
deb-1,
C49H3.6,
wsp-1,
mpst-5,
T11B7.1,
alp-1,
rad-51,
gei-18,
eps-8,
Y50D4A.4,
nhr-114,
figl-1,
B0507.3,
unc-23,
egl-9,
secs-1,
sas-5,
rnp-1,
ttx-1,
swsn-1,
sli-1,
zfp-3,
F41B4.1,
C11E4.6,
rrc-1,
vab-3,
abl-1,
hpo-34,
mbk-1,
F45B8.3,
dyn-1,
C09G1.4,
F09C8.2,
F52E10.4,
C06G1.5,
tag-343,
ztf-2,
F32B4.4,
F42G2.5,
hum-10,
srt-36,
K04F10.2,
wve-1,
R11F4.3,
mab-10,
ddl-2,
magu-1,
grd-7,
klp-3,
pcf-11,
sorb-1,
sap-49,
COL4A3BP,
RBM7,
CDK4,
CDKN2B
|
| 19123269 |
Empirically controlled mapping of the Caenorhabditis elegans protein-protein interactome network. Nat Methods Nicolas Simonis , Jean-François Rual , Anne-Ruxandra Carvunis , Murat Tasan , Irma Lemmens , Tomoko Hirozane-Kishikawa , Tong Hao , Julie M Sahalie , Kavitha Venkatesan , Fana Gebreab , Sebiha Cevik , Niels Klitgord , Changyu Fan , Pascal Braun , Ning Li , Nono Ayivi-Guedehoussou , Elizabeth Dann , Nicolas Bertin , David Szeto , Amélie Dricot , Muhammed A Yildirim , Chenwei Lin , Anne-Sophie de Smet , Huey-Ling Kao , Christophe Simon , Alex Smolyar , Jin Sook Ahn , Muneesh Tewari , Mike Boxem , Stuart Milstein , Haiyuan Yu , Matija Dreze , Jean Vandenhaute , Kristin C Gunsalus , Michael E Cusick , David E Hill , Jan Tavernier , Frederick P Roth , Marc Vidal |
2009-01-01 | - |
| 18692475 |
A protein domain-based interactome network for C. elegans early embryogenesis. Cell Mike Boxem , Zoltan Maliga , Niels Klitgord , Na Li , Irma Lemmens , Miyeko Mana , Lorenzo de Lichtervelde , Joram D Mul , Diederik van de Peut , Maxime Devos , Nicolas Simonis , Muhammed A Yildirim , Murat Cokol , Huey-Ling Kao , Anne-Sophie de Smet , Haidong Wang , Anne-Lore Schlaitz , Tong Hao , Stuart Milstein , Changyu Fan , Mike Tipsword , Kevin Drew , Matilde Galli , Kahn Rhrissorrakrai , David Drechsel , Daphne Koller , Frederick P Roth , Lilia M Iakoucheva , A Keith Dunker , Richard Bonneau , Kristin C Gunsalus , David E Hill , Fabio Piano , Jan Tavernier , Sander van den Heuvel , Anthony A Hyman , Marc Vidal |
2008-08-08 | - |
| 18298590 |
Traffic Wei Wang , Magali Bouhours , Elena O Gracheva , Edward H Liao , Keli Xu , Ameet S Sengar , Xiaofeng Xin , John Roder , Charles Boone , Janet E Richmond , Mei Zhen , Sean E Egan |
2008-05-01 |
dab-1,
itsn-1
|
| 17897480 |
A global analysis of genetic interactions in Caenorhabditis elegans. J. Biol. Alexandra B Byrne , Matthew T Weirauch , Victoria Wong , Martina Koeva , Scott J Dixon , Joshua M Stuart , Peter J Roy |
2007-01-01 |
mex-3,
vps-20,
did-2,
pop-1,
col-48,
ftn-2,
T20F5.6,
unc-73,
lin-44,
let-502,
atp-3,
unc-40,
cpb-3,
lin-35,
pnk-1,
cdc-25.1,
mei-2,
cye-1,
glh-1,
sem-4,
lrp-1,
ego-1,
gld-1,
cyc-1,
cfim-1,
gska-3,
sup-17,
spd-2,
aph-1,
ikb-1,
sur-6,
cco-1,
mom-5,
fog-3,
aph-2,
lam-3,
hsf-1,
par-6,
vps-25,
gsk-3,
F22G12.4,
vps-28,
pry-1,
hmp-2,
sur-2,
vab-19,
ZK546.14,
vps-24,
mog-5,
cpb-2,
sma-6,
icd-1,
vps-32.1,
dpy-10,
dpy-2,
egl-27,
B0252.1,
tra-2,
sod-1,
cki-1,
mig-5,
dab-1,
zyg-9,
prx-5,
let-23,
mel-11,
kin-15,
mex-6,
ptp-3,
unc-53,
unc-130,
F54D5.5,
lin-29,
sop-2,
hpr-17,
lin-7,
mog-4,
unc-52,
par-2,
daf-2,
cri-3,
clpf-1,
npp-9,
F59A2.5,
C34C12.8,
M01F1.8,
pitp-1,
rpl-37,
nhr-6,
sel-8,
rilp-1,
unc-93,
C46F11.5,
C46F11.4,
npr-15,
pdi-1,
dph-1,
alkb-8,
C14B1.9
|
| 9851916 |
Genome sequence of the nematode C. elegans: a platform for investigating biology. Science C. elegans Sequencing Consortium |
1998-12-11 | - |
| 排名 | 科研单位 | 文献 |
|---|---|---|
| {{affIndex+1}} |
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| 排名 | 研究人员 | 文献 |
|---|---|---|
| {{authorIndex+1}} |
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