| Type | Description |
|---|---|
| Definition | cytochrome bd-I ubiquinol oxidase subunit CydX |
| Date | Results | Publications |
|---|---|---|
| 2020-04-18 12:10:00 | structure of the E. coli cytochrome bd-I oxidase to a resolution of 2.7 angstroms; structure contains an accessory subunit CydH encoded by ynhF, the L-subfamily-specific Q-loop domain, a structural ubiquinone-8 cofactor, an active-site density interpreted as dioxygen, distinct water-filled proton channels, and an oxygen-conducting pathway | 31604309 |
| Type | IDs |
|---|---|
| Synonymous | ECK0723, ybgT |
| Gene |
UniProtKB-ID:
CYDX_ECOLI
UniprotKB:
P56100
UniParc:
UPI000013A341
EMBL:
J03939,
U00096,
U30934,
AP009048
EnsemblGenome:
BAE76359,
b4515
KO:
ecj:JW0724,
eco:b4515
|
| Nucleutide sequences |
EMBL-CDS:
ABD18645.1,
BAE76359.1
EnsemblGenome_TRS:
BAE76359,
ABD18645
|
| Protein sequencees |
EnsemblGenome_PRO:
BAE76359,
ABD18645
RefSeq:
YP_588444.1
|
| Others |
UniRef100:
UniRef100_P56100
UniRef90:
UniRef90_P56100
UniRef50:
UniRef50_P56100
|
| {{proteinIndex+1}} | mRNA | Protein | UniprotKB | Description | ||||
|---|---|---|---|---|---|---|---|---|
| Refseq |
{{protein.nucleotideVersion}}
Ensembl: {{protein.nucleotideEnsembl}} |
{{protein.proteinVersion}}
Ensembl: {{protein.proteinEnsembl}} |
{{uniprot}} , |
Definition: {{{protein.definition}}}Transcript Veriant:{{protein.transcriptVeriant}} Status: {{protein.status}} |
||||
| Location | {{protein.contigId}} ( {{protein.positionStart}}..{{protein.positionEnd}} , {{protein.orientation}} ) | |||||||
| Conserved domain | Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
{{conservedDomain.comments == '' || conservedDomain.comments == null ? "-" : conservedDomain.comments }} |
Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
{{conservedDomain.comments == '' || conservedDomain.comments == null ? "-" : conservedDomain.comments }} |
||||
暂无数据
| Pubmed编号 | 文献信息 | 发表日期 | 相关基因 |
|---|---|---|---|
| 31604309 |
Active site rearrangement and structural divergence in prokaryotic respiratory oxidases. Science S Safarian , A Hahn , D J Mills , M Radloff , M L Eisinger , A Nikolaev , J Meier-Credo , F Melin , H Miyoshi , R B Gennis , J Sakamoto , J D Langer , P Hellwig , W Kühlbrandt , H Michel |
2019-10-04 | - |
| 24681096 |
FEBS Lett. Jo Hoeser , Sangjin Hong , Gerfried Gehmann , Robert B Gennis , Thorsten Friedrich |
2014-05-02 | - |
| 23749980 |
J. Bacteriol. Caitlin E VanOrsdel , Shantanu Bhatt , Rondine J Allen , Evan P Brenner , Jessica J Hobson , Aqsa Jamil , Brittany M Haynes , Allyson M Genson , Matthew R Hemm |
2013-08-01 | - |
| 21778229 |
Membrane localization of small proteins in Escherichia coli. J Biol Chem Fanette Fontaine , Ryan T Fuchs , Gisela Storz |
2011-09-16 | - |
| 19734316 |
Small stress response proteins in Escherichia coli: proteins missed by classical proteomic studies. J. Bacteriol. Matthew R Hemm , Brian J Paul , Juan Miranda-RÃos , Aixia Zhang , Nima Soltanzad , Gisela Storz |
2010-01-01 |
ykgO,
cydX,
yneM,
yncL,
ynhF,
ypfM,
ythA,
ypdK,
ykgR,
yohP,
yqeL,
ilvX,
yobI,
azuC,
yoeI,
yoaK,
yoaJ,
ykgM,
acrZ,
yobF,
yqgB,
cbdX
|
| 19854892 |
Global approaches for finding small RNA and small open reading frame functions. J. Bacteriol. Karen M Wassarman , Patricia J Kiley |
2010-01-01 |
ykgO,
cydX,
blr,
micA,
glmY,
rybB,
yneM,
yncL,
ynhF,
ypfM,
ythA,
yqcG,
ypdK,
ykgR,
yohP,
yqeL,
ilvX,
yobI,
azuC,
yoeI,
sroH,
yoaK,
yoaJ,
ykgM,
ssrA,
ybaM,
acrZ,
yceO,
yobF,
mgrB,
yqgB,
cbdX
|
| 19210615 |
Hydrophobic peptides: novel regulators within bacterial membrane. Mol. Microbiol. Eric Alix , Anne-Béatrice Blanc-Potard |
2009-04-01 |
pmrR,
cydX,
ymiA,
yohO,
hokE,
hokB,
ldrD,
hokA,
ldrA,
ldrB,
ecnB,
hokC,
ldrC,
yneM,
yncL,
ynhF,
ydgU,
tisB,
shoB,
ibsA,
ibsB,
ibsC,
ibsD,
ibsE,
yqfG,
acrZ,
safA,
hokD,
kdpF,
cbdX
|
| 19121005 |
Small membrane proteins found by comparative genomics and ribosome binding site models. Mol. Microbiol. Matthew R Hemm , Brian J Paul , Thomas D Schneider , Gisela Storz , Kenneth E Rudd |
2008-12-01 | - |
| 16738553 |
Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Mol. Syst. Biol. Koji Hayashi , Naoki Morooka , Yoshihiro Yamamoto , Katsutoshi Fujita , Katsumi Isono , Sunju Choi , Eiichi Ohtsubo , Tomoya Baba , Barry L Wanner , Hirotada Mori , Takashi Horiuchi |
2006-01-01 |
pmrR,
torI,
yaeP,
ykfH,
ykgO,
ylcG,
rzoD,
ybdZ,
cydX,
gnsA,
insA,
ymgF,
ymiA,
yciX,
rzoR,
ynfO,
yniD,
yobH,
yoeB,
yohO,
arnE,
ypeB,
ypfN,
ypjJ,
arfA,
yheV,
ysaB,
sgcB,
yjhX,
ytjA,
yibT,
yicS,
yidD,
yifL,
ghoT,
yjjZ,
mntS,
iroK,
wecF,
yigE,
blr,
yggP,
cpxP,
hdfR,
thiS,
greB,
rtcA,
smf,
ygcU,
ypjK,
hokE,
sslE,
glcF,
glcE,
yhaM,
tdcG,
ytfR,
hokB,
ldrD,
hokA,
ldrA,
ldrB,
ecnA,
ecnB,
yfjD,
yhdP,
yjjV,
cysW,
hokC,
ghxQ,
tatD,
yjdP,
cutC,
nirC,
frlC,
aroK,
gntU,
dgoD,
dgoA,
dgoR,
yigL,
ldrC,
ylbE,
ydbJ,
yeiW,
yehK,
yneM,
ykfM,
ylcI,
yciY,
yncL,
ylcH,
ynhF,
yciZ,
ydgU,
ypfM,
ymgI,
ymgJ,
dinQ
|
| 16397293 |
Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Nucleic Acids Res. Monica Riley , Takashi Abe , Martha B Arnaud , Mary K B Berlyn , Frederick R Blattner , Roy R Chaudhuri , Jeremy D Glasner , Takashi Horiuchi , Ingrid M Keseler , Takehide Kosuge , Hirotada Mori , Nicole T Perna , Guy Plunkett , Kenneth E Rudd , Margrethe H Serres , Gavin H Thomas , Nicholas R Thomson , David Wishart , Barry L Wanner |
2006-01-01 |
pmrR,
yfaS,
torI,
yaeP,
ykfH,
ykgO,
ylcG,
rzoD,
ybdZ,
cydX,
gnsA,
insA,
ymgF,
ymiA,
yciX,
rzoR,
ynfO,
yniD,
yobH,
yoeF,
yoeB,
yohO,
arnE,
ypdJ,
ypeB,
ypfN,
ypjJ,
arfA,
yheV,
ysaB,
sgcB,
yjhX,
ytjA,
yibT,
yicS,
yidD,
yifL,
ghoT,
yjjZ,
mntS,
iroK,
yifN,
wecF,
yigE,
blr,
yggP,
cpxP,
ygaY,
hdfR,
thiS,
yedN,
greB,
rtcA,
smf,
ygcU,
ypjK,
hokE,
sslE,
glcF,
glcE,
glvC,
yhaM,
tdcG,
ytfR,
yehH,
hokB,
ldrD,
hokA,
ldrA,
ldrB,
ecnA,
ecnB,
gapC,
yfjD,
yhdP,
yjjV,
cysW,
hokC,
ghxQ,
tatD,
yjdP,
cutC,
nirC,
frlC,
aroK,
gntU,
yedS,
dgoD,
dgoA,
dgoR,
yigL,
ldrC,
ylbE,
ydbJ,
yeiW,
yehK,
yaiX,
yoeA,
yneM
|
| 排名 | 科研单位 | 文献 |
|---|---|---|
| {{affIndex+1}} |
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| 排名 | 研究人员 | 文献 |
|---|---|---|
| {{authorIndex+1}} |
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目前还没有研究热点人员