torI - CPS-53 (KpLE1) prophage; prophage CPS-53 recombination directionality factor and response regulator inhibitor-BMKCloudï½ç¾è¿å®¢äº

例如："NBL1", "4681", "drought"

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1450232 torI

基因描述

Type	Description
Definition	CPS-53 (KpLE1) prophage; prophage CPS-53 recombination directionality factor and response regulator inhibitor

研究结论

Date	Results	Publications
2012-07-21 10:42:00	DnaJ, without the aid of DnaK/GrpE, is capable of increasing the efficiency of KplE1 excision by causing a conformational stabilization that allows TorI to adopt a more favorable conformation for binding to its specific DNA target	22378785

名称对应

Type	IDs
Synonymous	ECK2359
Gene	UniProtKB-ID: TORI_ECOLI UniprotKB: Q2EES9 UniParc: UPI000009B0A9 EMBL: AP009048, U00096 EnsemblGenome: BAE76704, b4501 KO: eco:b4501, ecj:JW5387
Nucleutide sequences	EMBL-CDS: BAE76704.1, ABD18695.1 EnsemblGenome_TRS: ABD18695, BAE76704
Protein sequencees	EnsemblGenome_PRO: BAE76704, ABD18695 RefSeq: YP_588463.1
Others	UniRef100: UniRef100_Q2EES9 UniRef90: UniRef90_Q2EES9 UniRef50: UniRef50_Q2EES9

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mRNA

Protein

UniprotKB

Description

Refseq

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Pubmed编号	文献信息	发表日期	相关基因
24561554	The binary protein-protein interaction landscape of Escherichia coli. Nat. Biotechnol. Seesandra V Rajagopala , Patricia Sikorski , Ashwani Kumar , Roberto Mosca , James Vlasblom , Roland Arnold , Jonathan Franca-Koh , Suman B Pakala , Sadhna Phanse , Arnaud Ceol , Roman HÃ¤user , Gabriella Siszler , Stefan Wuchty , Andrew Emili , Mohan Babu , Patrick Aloy , Rembert Pieper , Peter Uetz	2014-03-01	-
22378785	DnaJ (Hsp40 protein) binding to folded substrate impacts KplE1 prophage excision efficiency. J Biol Chem Tania M Puvirajesinghe , Latifa Elantak , Sabrina Lignon , Nathalie Franche , Marianne Ilbert , Mireille Ansaldi	2012-04-20	-
20949106	Tight regulation of the intS gene of the KplE1 prophage: a new paradigm for integrase gene regulation. PLoS Genet GaÃ«l Panis , Yohann Duverger , Elise Courvoisier-Dezord , StÃ©phanie Champ , Emmanuel Talla , Mireille Ansaldi	2010-10-07	-
20494389	Protein binding sites involved in the assembly of the KplE1 prophage intasome. Virology GaÃ«l Panis , Yohann Duverger , StÃ©phanie Champ , Mireille Ansaldi	2010-08-15	-
17545146	Control and regulation of KplE1 prophage site-specific recombination: a new recombination module analyzed. J Biol Chem GaÃ«l Panis , Vincent MÃ©jean , Mireille Ansaldi	2007-07-27	-
16397293	Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Nucleic Acids Res. Monica Riley , Takashi Abe , Martha B Arnaud , Mary K B Berlyn , Frederick R Blattner , Roy R Chaudhuri , Jeremy D Glasner , Takashi Horiuchi , Ingrid M Keseler , Takehide Kosuge , Hirotada Mori , Nicole T Perna , Guy Plunkett , Kenneth E Rudd , Margrethe H Serres , Gavin H Thomas , Nicholas R Thomson , David Wishart , Barry L Wanner	2006-01-01	pmrR, yfaS, torI, yaeP, ykfH, ykgO, ylcG, rzoD, ybdZ, cydX, gnsA, insA, ymgF, ymiA, yciX, rzoR, ynfO, yniD, yobH, yoeF, yoeB, yohO, arnE, ypdJ, ypeB, ypfN, ypjJ, arfA, yheV, ysaB, sgcB, yjhX, ytjA, yibT, yicS, yidD, yifL, ghoT, yjjZ, mntS, iroK, yifN, wecF, yigE, blr, yggP, cpxP, ygaY, hdfR, thiS, yedN, greB, rtcA, smf, ygcU, ypjK, hokE, sslE, glcF, glcE, glvC, yhaM, tdcG, ytfR, yehH, hokB, ldrD, hokA, ldrA, ldrB, ecnA, ecnB, gapC, yfjD, yhdP, yjjV, cysW, hokC, ghxQ, tatD, yjdP, cutC, nirC, frlC, aroK, gntU, yedS, dgoD, dgoA, dgoR, yigL, ldrC, ylbE, ydbJ, yeiW, yehK, yaiX, yoeA, yneM
16738553	Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Mol. Syst. Biol. Koji Hayashi , Naoki Morooka , Yoshihiro Yamamoto , Katsutoshi Fujita , Katsumi Isono , Sunju Choi , Eiichi Ohtsubo , Tomoya Baba , Barry L Wanner , Hirotada Mori , Takashi Horiuchi	2006-01-01	pmrR, torI, yaeP, ykfH, ykgO, ylcG, rzoD, ybdZ, cydX, gnsA, insA, ymgF, ymiA, yciX, rzoR, ynfO, yniD, yobH, yoeB, yohO, arnE, ypeB, ypfN, ypjJ, arfA, yheV, ysaB, sgcB, yjhX, ytjA, yibT, yicS, yidD, yifL, ghoT, yjjZ, mntS, iroK, wecF, yigE, blr, yggP, cpxP, hdfR, thiS, greB, rtcA, smf, ygcU, ypjK, hokE, sslE, glcF, glcE, yhaM, tdcG, ytfR, hokB, ldrD, hokA, ldrA, ldrB, ecnA, ecnB, yfjD, yhdP, yjjV, cysW, hokC, ghxQ, tatD, yjdP, cutC, nirC, frlC, aroK, gntU, dgoD, dgoA, dgoR, yigL, ldrC, ylbE, ydbJ, yeiW, yehK, yneM, ykfM, ylcI, yciY, yncL, ylcH, ynhF, yciZ, ydgU, ypfM, ymgI, ymgJ, dinQ
16079126	Structural and genetic analyses reveal a key role in prophage excision for the TorI response regulator inhibitor. J Biol Chem Latifa Elantak , Mireille Ansaldi , FranÃ§oise Guerlesquin , Vincent MÃ©jean , Xavier Morelli	2005-11-04	-
15197250	TorI, a response regulator inhibitor of phage origin in Escherichia coli. Proc. Natl. Acad. Sci. U.S.A. Mireille Ansaldi , Laurence ThÃ©raulaz , Vincent MÃ©jean	2004-06-22	torI
12886937	Prophages and bacterial genomics: what have we learned so far? Mol. Microbiol. Sherwood Casjens	2003-07-01	-

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