VNG_RS01050 - PadR family transcriptional regulator-BMKCloudï½ç¾è¿å®¢äº

1447162 VNG_RS01050

基因描述

Type	Description
Definition	PadR family transcriptional regulator

研究结论

Date	Results	Publications
2013-01-26 11:44:00	VNG0258H is a novel archaeal transcription factor that regulates gene expression to enable adaptation to the extremely oxidative, hypersaline niche of H. salinarum.	22846541

名称对应

Type	IDs
Synonymous	VNG0258H
Gene
Nucleutide sequences
Protein sequencees	RefSeq: WP_010902147.1
Others

全选

{{proteinIndex+1}}	mRNA	Protein	UniprotKB	Description
Refseq	{{protein.nucleotideVersion}} Ensembl: {{protein.nucleotideEnsembl}}	{{protein.proteinVersion}} Ensembl: {{protein.proteinEnsembl}}	{{uniprot}}	Definition: {{{protein.definition}}} Transcript Veriant:{{protein.transcriptVeriant}} Status: {{protein.status}}
Location	( {{protein.positionStart}}..{{protein.positionEnd}} )
Conserved domain	Region: {{conservedDomain.region == '' \|\| conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' \|\| conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' \|\| conservedDomain.family == null ? "-": conservedDomain.family}} CDD:	{{conservedDomain.comments == '' \|\| conservedDomain.comments == null ? "-" : conservedDomain.comments }}	Region: {{conservedDomain.region == '' \|\| conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' \|\| conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' \|\| conservedDomain.family == null ? "-": conservedDomain.family}} CDD:	{{conservedDomain.comments == '' \|\| conservedDomain.comments == null ? "-" : conservedDomain.comments }}

mRNA

Protein

UniprotKB

Description

Refseq

Ensembl: {{protein.nucleotideEnsembl}}

Ensembl: {{protein.proteinEnsembl}}

Definition: {{{protein.definition}}}

Transcript Veriant:{{protein.transcriptVeriant}}

Status: {{protein.status}}

Location

( {{protein.positionStart}}..{{protein.positionEnd}} )

暂无数据

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Pubmed编号	文献信息	发表日期	相关基因
26042526	A manual curation strategy to improve genome annotation: application to a set of haloarchael genomes. Life (Basel) Friedhelm Pfeiffer , Dieter Oesterhelt	2015-06-02	-
22846541	The RosR transcription factor is required for gene expression dynamics in response to extreme oxidative stress in a hypersaline-adapted archaeon. BMC Genomics Kriti Sharma , Nicholas Gillum , J Lomax Boyd , Amy Schmid	2012-01-01	VNG_RS01050
18313895	Evolution in the laboratory: the genome of Halobacterium salinarum strain R1 compared to that of strain NRC-1. Genomics F Pfeiffer , S C Schuster , A Broicher , M Falb , P Palm , K Rodewald , A Ruepp , J Soppa , J Tittor , D Oesterhelt	2008-04-01	OE_RS00150, OE_RS00200, OE_RS00235, OE_RS00240, OE_RS00480, OE_RS00840, OE_RS00845, OE_RS02065, OE_RS02325, OE_RS03915, OE_RS03920, OE_RS04860, OE_RS05835, OE_RS06170, OE_RS06180, OE_RS06360, OE_RS06660, OE_RS07310, OE_RS07575, OE_RS09070, OE_RS09660, OE_RS10240, OE_RS10520, OE_RS10525, OE_RS10530, OE_RS10535, OE_RS10700, OE_RS10795, OE_RS10835, OE_RS10935, OE_RS10990, OE_RS11155, OE_RS11180, OE_RS11195, OE_RS11275, OE_RS11400, OE_RS11555, OE_RS11565, OE_RS11575, OE_RS11635, OE_RS11730, OE_RS11770, OE_RS11870, OE_RS11925, OE_RS12055, OE_RS12160, OE_RS12175, OE_RS12195, OE_RS12585, OE_RS12765, OE_RS12780, OE_RS12905, OE_RS12915, OE_RS12935, OE_RS12940, OE_RS12945, OE_RS12970, OE_RS13035, OE_RS13120, OE_RS13155, OE_RS13195, OE_RS13265, OE_RS13290, OE_RS13410, OE_RS00010, OE_RS00015, OE_RS00020, OE_RS00025, OE_RS00045, OE_RS00050, OE_RS00055, OE_RS00060, OE_RS00065, OE_RS00070, OE_RS00075, OE_RS00080, OE_RS00085, OE_RS00090, OE_RS00095, OE_RS00100, OE_RS00105, OE_RS00110, OE_RS00115, OE_RS00120, OE_RS00125, OE_RS00135, OE_RS00140, OE_RS00145, OE_RS00155, OE_RS00160, OE_RS00165, OE_RS00170, OE_RS00175, OE_RS00180, OE_RS00185, OE_RS00190, OE_RS00205, OE_RS00215, OE_RS00220

Pubmed编号

文献信息

发表日期

相关基因

26042526

A manual curation strategy to improve genome annotation: application to a set of haloarchael genomes.

Life (Basel) Friedhelm Pfeiffer , Dieter Oesterhelt

2015-06-02

22846541

The RosR transcription factor is required for gene expression dynamics in response to extreme oxidative stress in a hypersaline-adapted archaeon.

BMC Genomics Kriti Sharma , Nicholas Gillum , J Lomax Boyd , Amy Schmid

2012-01-01

VNG_RS01050

18313895

Evolution in the laboratory: the genome of Halobacterium salinarum strain R1 compared to that of strain NRC-1.

Genomics F Pfeiffer , S C Schuster , A Broicher , M Falb , P Palm , K Rodewald , A Ruepp , J Soppa , J Tittor , D Oesterhelt

2008-04-01

OE_RS00150, OE_RS00200, OE_RS00235, OE_RS00240, OE_RS00480, OE_RS00840, OE_RS00845, OE_RS02065, OE_RS02325, OE_RS03915, OE_RS03920, OE_RS04860, OE_RS05835, OE_RS06170, OE_RS06180, OE_RS06360, OE_RS06660, OE_RS07310, OE_RS07575, OE_RS09070, OE_RS09660, OE_RS10240, OE_RS10520, OE_RS10525, OE_RS10530, OE_RS10535, OE_RS10700, OE_RS10795, OE_RS10835, OE_RS10935, OE_RS10990, OE_RS11155, OE_RS11180, OE_RS11195, OE_RS11275, OE_RS11400, OE_RS11555, OE_RS11565, OE_RS11575, OE_RS11635, OE_RS11730, OE_RS11770, OE_RS11870, OE_RS11925, OE_RS12055, OE_RS12160, OE_RS12175, OE_RS12195, OE_RS12585, OE_RS12765, OE_RS12780, OE_RS12905, OE_RS12915, OE_RS12935, OE_RS12940, OE_RS12945, OE_RS12970, OE_RS13035, OE_RS13120, OE_RS13155, OE_RS13195, OE_RS13265, OE_RS13290, OE_RS13410, OE_RS00010, OE_RS00015, OE_RS00020, OE_RS00025, OE_RS00045, OE_RS00050, OE_RS00055, OE_RS00060, OE_RS00065, OE_RS00070, OE_RS00075, OE_RS00080, OE_RS00085, OE_RS00090, OE_RS00095, OE_RS00100, OE_RS00105, OE_RS00110, OE_RS00115, OE_RS00120, OE_RS00125, OE_RS00135, OE_RS00140, OE_RS00145, OE_RS00155, OE_RS00160, OE_RS00165, OE_RS00170, OE_RS00175, OE_RS00180, OE_RS00185, OE_RS00190, OE_RS00205, OE_RS00215, OE_RS00220

研究热度

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