A reference map of the human binary protein interactome.

Nature     Katja Luck , Dae-Kyum Kim , Luke Lambourne , Kerstin Spirohn , Bridget E Begg , Wenting Bian , Ruth Brignall , Tiziana Cafarelli , Francisco J Campos-Laborie , Benoit Charloteaux , Dongsic Choi , Atina G Coté , Meaghan Daley , Steven Deimling , Alice Desbuleux , Amélie Dricot , Marinella Gebbia , Madeleine F Hardy , Nishka Kishore , Jennifer J Knapp , István A Kovács , Irma Lemmens , Miles W Mee , Joseph C Mellor , Carl Pollis , Carles Pons , Aaron D Richardson , Sadie Schlabach , Bridget Teeking , Anupama Yadav , Mariana Babor , Dawit Balcha , Omer Basha , Christian Bowman-Colin , Suet-Feung Chin , Soon Gang Choi , Claudia Colabella , Georges Coppin , Cassandra D'Amata , David De Ridder , Steffi De Rouck , Miquel Duran-Frigola , Hanane Ennajdaoui , Florian Goebels , Liana Goehring , Anjali Gopal , Ghazal Haddad , Elodie Hatchi , Mohamed Helmy , Yves Jacob , Yoseph Kassa , Serena Landini , Roujia Li , Natascha van Lieshout , Andrew MacWilliams , Dylan Markey , Joseph N Paulson , Sudharshan Rangarajan , John Rasla , Ashyad Rayhan , Thomas Rolland , Adriana San-Miguel , Yun Shen , Dayag Sheykhkarimli , Gloria M Sheynkman , Eyal Simonovsky , Murat Taşan , Alexander Tejeda , Vincent Tropepe , Jean-Claude Twizere , Yang Wang , Robert J Weatheritt , Jochen Weile , Yu Xia , Xinping Yang , Esti Yeger-Lotem , Quan Zhong , Patrick Aloy , Gary D Bader , Javier De Las Rivas , Suzanne Gaudet , Tong Hao , Janusz Rak , Jan Tavernier , David E Hill , Marc Vidal , Frederick P Roth , Michael A Calderwood

Protein interaction screening for the ankyrin repeats and suppressor of cytokine signaling (SOCS) box (ASB) family identify Asb11 as a novel endoplasmic reticulum resident ubiquitin ligase.

J Biol Chem     Christina Aaen Andresen , Stine Smedegaard , Kathrine Beck Sylvestersen , Charlotte Svensson , Diego Iglesias-Gato , Giuseppe Cazzamali , Tine Kragh Nielsen , Michael Lund Nielsen , Amilcar Flores-Morales

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.

Brief. Bioinformatics     Pascale Gaudet , Michael S Livstone , Suzanna E Lewis , Paul D Thomas

An atlas of combinatorial transcriptional regulation in mouse and man.

Cell     Timothy Ravasi , Harukazu Suzuki , Carlo Vittorio Cannistraci , Shintaro Katayama , Vladimir B Bajic , Kai Tan , Altuna Akalin , Sebastian Schmeier , Mutsumi Kanamori-Katayama , Nicolas Bertin , Piero Carninci , Carsten O Daub , Alistair R R Forrest , Julian Gough , Sean Grimmond , Jung-Hoon Han , Takehiro Hashimoto , Winston Hide , Oliver Hofmann , Atanas Kamburov , Mandeep Kaur , Hideya Kawaji , Atsutaka Kubosaki , Timo Lassmann , Erik van Nimwegen , Cameron Ross MacPherson , Chihiro Ogawa , Aleksandar Radovanovic , Ariel Schwartz , Rohan D Teasdale , Jesper Tegnér , Boris Lenhard , Sarah A Teichmann , Takahiro Arakawa , Noriko Ninomiya , Kayoko Murakami , Michihira Tagami , Shiro Fukuda , Kengo Imamura , Chikatoshi Kai , Ryoko Ishihara , Yayoi Kitazume , Jun Kawai , David A Hume , Trey Ideker , Yoshihide Hayashizaki

Genome-scale RNAi screen for host factors required for HIV replication.

Cell Host Microbe     Honglin Zhou , Min Xu , Qian Huang , Adam T Gates , Xiaohua D Zhang , John C Castle , Erica Stec , Marc Ferrer , Berta Strulovici , Daria J Hazuda , Amy S Espeseth

Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes.

Genome Res.     Kouichi Kimura , Ai Wakamatsu , Yutaka Suzuki , Toshio Ota , Tetsuo Nishikawa , Riu Yamashita , Jun-ichi Yamamoto , Mitsuo Sekine , Katsuki Tsuritani , Hiroyuki Wakaguri , Shizuko Ishii , Tomoyasu Sugiyama , Kaoru Saito , Yuko Isono , Ryotaro Irie , Norihiro Kushida , Takahiro Yoneyama , Rie Otsuka , Katsuhiro Kanda , Takahide Yokoi , Hiroshi Kondo , Masako Wagatsuma , Katsuji Murakawa , Shinichi Ishida , Tadashi Ishibashi , Asako Takahashi-Fujii , Tomoo Tanase , Keiichi Nagai , Hisashi Kikuchi , Kenta Nakai , Takao Isogai , Sumio Sugano

ASB proteins interact with Cullin5 and Rbx2 to form E3 ubiquitin ligase complexes.

FEBS Lett.     Junya Kohroki , Takehiro Nishiyama , Takaaki Nakamura , Yasuhiko Masuho

The DNA sequence of the human X chromosome.

Nature     Mark T Ross , Darren V Grafham , Alison J Coffey , Steven Scherer , Kirsten McLay , Donna Muzny , Matthias Platzer , Gareth R Howell , Christine Burrows , Christine P Bird , Adam Frankish , Frances L Lovell , Kevin L Howe , Jennifer L Ashurst , Robert S Fulton , Ralf Sudbrak , Gaiping Wen , Matthew C Jones , Matthew E Hurles , T Daniel Andrews , Carol E Scott , Stephen Searle , Juliane Ramser , Adam Whittaker , Rebecca Deadman , Nigel P Carter , Sarah E Hunt , Rui Chen , Andrew Cree , Preethi Gunaratne , Paul Havlak , Anne Hodgson , Michael L Metzker , Stephen Richards , Graham Scott , David Steffen , Erica Sodergren , David A Wheeler , Kim C Worley , Rachael Ainscough , Kerrie D Ambrose , M Ali Ansari-Lari , Swaroop Aradhya , Robert I S Ashwell , Anne K Babbage , Claire L Bagguley , Andrea Ballabio , Ruby Banerjee , Gary E Barker , Karen F Barlow , Ian P Barrett , Karen N Bates , David M Beare , Helen Beasley , Oliver Beasley , Alfred Beck , Graeme Bethel , Karin Blechschmidt , Nicola Brady , Sarah Bray-Allen , Anne M Bridgeman , Andrew J Brown , Mary J Brown , David Bonnin , Elspeth A Bruford , Christian Buhay , Paula Burch , Deborah Burford , Joanne Burgess , Wayne Burrill , John Burton , Jackie M Bye , Carol Carder , Laura Carrel , Joseph Chako , Joanne C Chapman , Dean Chavez , Ellson Chen , Guan Chen , Yuan Chen , Zhijian Chen , Craig Chinault , Alfredo Ciccodicola , Sue Y Clark , Graham Clarke , Chris M Clee , Sheila Clegg , Kerstin Clerc-Blankenburg , Karen Clifford , Vicky Cobley , Charlotte G Cole , Jen S Conquer , Nicole Corby , Richard E Connor , Robert David , Joy Davies , Clay Davis , John Davis , Oliver Delgado , Denise Deshazo , Pawandeep Dhami , Yan Ding , Huyen Dinh , Steve Dodsworth , Heather Draper , Shannon Dugan-Rocha , Andrew Dunham , Matthew Dunn , K James Durbin , Ireena Dutta , Tamsin Eades , Matthew Ellwood , Alexandra Emery-Cohen , Helen Errington , Kathryn L Evans , Louisa Faulkner , Fiona Francis , John Frankland , Audrey E Fraser , Petra Galgoczy , James Gilbert , Rachel Gill , Gernot Glöckner , Simon G Gregory , Susan Gribble , Coline Griffiths , Russell Grocock , Yanghong Gu , Rhian Gwilliam , Cerissa Hamilton , Elizabeth A Hart , Alicia Hawes , Paul D Heath , Katja Heitmann , Steffen Hennig , Judith Hernandez , Bernd Hinzmann , Sarah Ho , Michael Hoffs , Phillip J Howden , Elizabeth J Huckle , Jennifer Hume , Paul J Hunt , Adrienne R Hunt , Judith Isherwood , Leni Jacob , David Johnson , Sally Jones , Pieter J de Jong , Shirin S Joseph , Stephen Keenan , Susan Kelly , Joanne K Kershaw , Ziad Khan , Petra Kioschis , Sven Klages , Andrew J Knights , Anna Kosiura , Christie Kovar-Smith , Gavin K Laird , Cordelia Langford , Stephanie Lawlor , Margaret Leversha , Lora Lewis , Wen Liu , Christine Lloyd , David M Lloyd , Hermela Loulseged , Jane E Loveland , Jamieson D Lovell , Ryan Lozado , Jing Lu , Rachael Lyne , Jie Ma , Manjula Maheshwari , Lucy H Matthews , Jennifer McDowall , Stuart McLaren , Amanda McMurray , Patrick Meidl , Thomas Meitinger , Sarah Milne , George Miner , Shailesh L Mistry , Margaret Morgan , Sidney Morris , Ines Müller , James C Mullikin , Ngoc Nguyen , Gabriele Nordsiek , Gerald Nyakatura , Christopher N O'Dell , Geoffery Okwuonu , Sophie Palmer , Richard Pandian , David Parker , Julia Parrish , Shiran Pasternak , Dina Patel , Alex V Pearce , Danita M Pearson , Sarah E Pelan , Lesette Perez , Keith M Porter , Yvonne Ramsey , Kathrin Reichwald , Susan Rhodes , Kerry A Ridler , David Schlessinger , Mary G Schueler , Harminder K Sehra , Charles Shaw-Smith , Hua Shen , Elizabeth M Sheridan , Ratna Shownkeen , Carl D Skuce , Michelle L Smith , Elizabeth C Sotheran , Helen E Steingruber , Charles A Steward , Roy Storey , R Mark Swann , David Swarbreck , Paul E Tabor , Stefan Taudien , Tineace Taylor , Brian Teague , Karen Thomas , Andrea Thorpe , Kirsten Timms , Alan Tracey , Steve Trevanion , Anthony C Tromans , Michele d'Urso , Daniel Verduzco , Donna Villasana , Lenee Waldron , Melanie Wall , Qiaoyan Wang , James Warren , Georgina L Warry , Xuehong Wei , Anthony West , Siobhan L Whitehead , Mathew N Whiteley , Jane E Wilkinson , David L Willey , Gabrielle Williams , Leanne Williams , Angela Williamson , Helen Williamson , Laurens Wilming , Rebecca L Woodmansey , Paul W Wray , Jennifer Yen , Jingkun Zhang , Jianling Zhou , Huda Zoghbi , Sara Zorilla , David Buck , Richard Reinhardt , Annemarie Poustka , André Rosenthal , Hans Lehrach , Alfons Meindl , Patrick J Minx , Ladeana W Hillier , Huntington F Willard , Richard K Wilson , Robert H Waterston , Catherine M Rice , Mark Vaudin , Alan Coulson , David L Nelson , George Weinstock , John E Sulston , Richard Durbin , Tim Hubbard , Richard A Gibbs , Stephan Beck , Jane Rogers , David R Bentley

The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).

Genome Res.     Daniela S Gerhard , Lukas Wagner , Elise A Feingold , Carolyn M Shenmen , Lynette H Grouse , Greg Schuler , Steven L Klein , Susan Old , Rebekah Rasooly , Peter Good , Mark Guyer , Allison M Peck , Jeffery G Derge , David Lipman , Francis S Collins , Wonhee Jang , Steven Sherry , Mike Feolo , Leonie Misquitta , Eduardo Lee , Kirill Rotmistrovsky , Susan F Greenhut , Carl F Schaefer , Kenneth Buetow , Tom I Bonner , David Haussler , Jim Kent , Mark Kiekhaus , Terry Furey , Michael Brent , Christa Prange , Kirsten Schreiber , Nicole Shapiro , Narayan K Bhat , Ralph F Hopkins , Florence Hsie , Tom Driscoll , M Bento Soares , Tom L Casavant , Todd E Scheetz , Michael J Brown-stein , Ted B Usdin , Shiraki Toshiyuki , Piero Carninci , Yulan Piao , Dawood B Dudekula , Minoru S H Ko , Koichi Kawakami , Yutaka Suzuki , Sumio Sugano , C E Gruber , M R Smith , Blake Simmons , Troy Moore , Richard Waterman , Stephen L Johnson , Yijun Ruan , Chia Lin Wei , S Mathavan , Preethi H Gunaratne , Jiaqian Wu , Angela M Garcia , Stephen W Hulyk , Edwin Fuh , Ye Yuan , Anna Sneed , Carla Kowis , Anne Hodgson , Donna M Muzny , John McPherson , Richard A Gibbs , Jessica Fahey , Erin Helton , Mark Ketteman , Anuradha Madan , Stephanie Rodrigues , Amy Sanchez , Michelle Whiting , Anup Madari , Alice C Young , Keith D Wetherby , Steven J Granite , Peggy N Kwong , Charles P Brinkley , Russell L Pearson , Gerard G Bouffard , Robert W Blakesly , Eric D Green , Mark C Dickson , Alex C Rodriguez , Jane Grimwood , Jeremy Schmutz , Richard M Myers , Yaron S N Butterfield , Malachi Griffith , Obi L Griffith , Martin I Krzywinski , Nancy Liao , Ryan Morin , Ryan Morrin , Diana Palmquist , Anca S Petrescu , Ursula Skalska , Duane E Smailus , Jeff M Stott , Angelique Schnerch , Jacqueline E Schein , Steven J M Jones , Robert A Holt , Agnes Baross , Marco A Marra , Sandra Clifton , Kathryn A Makowski , Stephanie Bosak , Joel Malek , MGC Project Team

Complete sequencing and characterization of 21,243 full-length human cDNAs.

Nat. Genet.     Toshio Ota , Yutaka Suzuki , Tetsuo Nishikawa , Tetsuji Otsuki , Tomoyasu Sugiyama , Ryotaro Irie , Ai Wakamatsu , Koji Hayashi , Hiroyuki Sato , Keiichi Nagai , Kouichi Kimura , Hiroshi Makita , Mitsuo Sekine , Masaya Obayashi , Tatsunari Nishi , Toshikazu Shibahara , Toshihiro Tanaka , Shizuko Ishii , Jun-ichi Yamamoto , Kaoru Saito , Yuri Kawai , Yuko Isono , Yoshitaka Nakamura , Kenji Nagahari , Katsuhiko Murakami , Tomohiro Yasuda , Takao Iwayanagi , Masako Wagatsuma , Akiko Shiratori , Hiroaki Sudo , Takehiko Hosoiri , Yoshiko Kaku , Hiroyo Kodaira , Hiroshi Kondo , Masanori Sugawara , Makiko Takahashi , Katsuhiro Kanda , Takahide Yokoi , Takako Furuya , Emiko Kikkawa , Yuhi Omura , Kumi Abe , Kumiko Kamihara , Naoko Katsuta , Kazuomi Sato , Machiko Tanikawa , Makoto Yamazaki , Ken Ninomiya , Tadashi Ishibashi , Hiromichi Yamashita , Katsuji Murakawa , Kiyoshi Fujimori , Hiroyuki Tanai , Manabu Kimata , Motoji Watanabe , Susumu Hiraoka , Yoshiyuki Chiba , Shinichi Ishida , Yukio Ono , Sumiyo Takiguchi , Susumu Watanabe , Makoto Yosida , Tomoko Hotuta , Junko Kusano , Keiichi Kanehori , Asako Takahashi-Fujii , Hiroto Hara , Tomo-o Tanase , Yoshiko Nomura , Sakae Togiya , Fukuyo Komai , Reiko Hara , Kazuha Takeuchi , Miho Arita , Nobuyuki Imose , Kaoru Musashino , Hisatsugu Yuuki , Atsushi Oshima , Naokazu Sasaki , Satoshi Aotsuka , Yoko Yoshikawa , Hiroshi Matsunawa , Tatsuo Ichihara , Namiko Shiohata , Sanae Sano , Shogo Moriya , Hiroko Momiyama , Noriko Satoh , Sachiko Takami , Yuko Terashima , Osamu Suzuki , Satoshi Nakagawa , Akihiro Senoh , Hiroshi Mizoguchi , Yoshihiro Goto , Fumio Shimizu , Hirokazu Wakebe , Haretsugu Hishigaki , Takeshi Watanabe , Akio Sugiyama , Makoto Takemoto , Bunsei Kawakami , Masaaki Yamazaki , Koji Watanabe , Ayako Kumagai , Shoko Itakura , Yasuhito Fukuzumi , Yoshifumi Fujimori , Megumi Komiyama , Hiroyuki Tashiro , Akira Tanigami , Tsutomu Fujiwara , Toshihide Ono , Katsue Yamada , Yuka Fujii , Kouichi Ozaki , Maasa Hirao , Yoshihiro Ohmori , Ayako Kawabata , Takeshi Hikiji , Naoko Kobatake , Hiromi Inagaki , Yasuko Ikema , Sachiko Okamoto , Rie Okitani , Takuma Kawakami , Saori Noguchi , Tomoko Itoh , Keiko Shigeta , Tadashi Senba , Kyoka Matsumura , Yoshie Nakajima , Takae Mizuno , Misato Morinaga , Masahide Sasaki , Takushi Togashi , Masaaki Oyama , Hiroko Hata , Manabu Watanabe , Takami Komatsu , Junko Mizushima-Sugano , Tadashi Satoh , Yuko Shirai , Yukiko Takahashi , Kiyomi Nakagawa , Koji Okumura , Takahiro Nagase , Nobuo Nomura , Hisashi Kikuchi , Yasuhiko Masuho , Riu Yamashita , Kenta Nakai , Tetsushi Yada , Yusuke Nakamura , Osamu Ohara , Takao Isogai , Sumio Sugano