truB - tRNA pseudouridine synthase B-BMKCloudï½ç¾è¿å®¢äº

1186169 truB

基因描述

Type	Description
Definition	tRNA pseudouridine synthase B

名称对应

Type	IDs
Synonymous	PSPTO4488
Gene	UniProtKB-ID: A0A0P9LPR0_9PSED, A0PCI9_PSESM, F3IHV0_PSEAV, A0A3M3Z3Q0_9PSED, A0A0N0WPE5_PSEYM, A0A099SZ13_PSEUB, A0A0Q0EGR3_PSESX, A0A2S3VBV3_PSESX, A0A0P9JD87_9PSED UniprotKB: A0A0P9LPR0, A0PCI9, F3IHV0, A0A3M3Z3Q0, A0A0N0WPE5, A0A099SZ13, A0A0Q0EGR3, A0A2S3VBV3, A0A0P9JD87 UniParc: UPI0000E868BE EMBL: PPYD01000002, LJRI01000888, RBTF01000274, LJPR01000034, AEAM01000213, RBPL01000092, CP034558, AE016853, SNVF01000022, LJRN01000116, RBOB01000060, RBQA01000132, RBOO01000344, RBUQ01000018, RBRI01000166, LJPT01000130, RBQC01000068 EnsemblGenome: ALO88_01550, AC503_3371, ALO36_01515, ALO87_03737, PSPTO_4488, PLA106_11481, PSTA9_04045, ALO94_04270 KO: pst:PSPTO_4488
Nucleutide sequences	EMBL-CDS: KPW46267.1, ABK79686.1, EGH96706.1, RMO89362.1, RMV43661.1, RMM70798.1, RMO86057.1, TES65762.1, KPY93778.1, RMQ66332.1, KPY85455.1, RMT29451.1, POF37445.1, RMM13744.1, QBI61715.1, KPW40221.1, RMN94316.1 Gene_ORFName: ALO88_01550, PLA106_11481, ALQ32_03901, ALQ72_00498, ALQ34_00245, ALP13_02018, ALQ00_03653, ALO36_01515, E2N90_18655, ALP50_03074, ALO94_04270, BCD74_102101, ALQ85_00352, EIZ61_09635, ALQ49_01267, ALO87_03737
Protein sequencees
Others	UniRef100: UniRef100_A0A0N0WPE5 UniRef90: UniRef90_Q4KIF4 UniRef50: UniRef50_Q4KIF4

全选

{{proteinIndex+1}}	mRNA	Protein	UniprotKB	Description
Refseq	{{protein.nucleotideVersion}} Ensembl: {{protein.nucleotideEnsembl}}	{{protein.proteinVersion}} Ensembl: {{protein.proteinEnsembl}}	{{uniprot}}	Definition: {{{protein.definition}}} Transcript Veriant:{{protein.transcriptVeriant}} Status: {{protein.status}}
Location	( {{protein.positionStart}}..{{protein.positionEnd}} )
Conserved domain	Region: {{conservedDomain.region == '' \|\| conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' \|\| conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' \|\| conservedDomain.family == null ? "-": conservedDomain.family}} CDD:	{{conservedDomain.comments == '' \|\| conservedDomain.comments == null ? "-" : conservedDomain.comments }}	Region: {{conservedDomain.region == '' \|\| conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' \|\| conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' \|\| conservedDomain.family == null ? "-": conservedDomain.family}} CDD:	{{conservedDomain.comments == '' \|\| conservedDomain.comments == null ? "-" : conservedDomain.comments }}

mRNA

Protein

UniprotKB

Description

Refseq

Ensembl: {{protein.nucleotideEnsembl}}

Ensembl: {{protein.proteinEnsembl}}

Definition: {{{protein.definition}}}

Transcript Veriant:{{protein.transcriptVeriant}}

Status: {{protein.status}}

Location

( {{protein.positionStart}}..{{protein.positionEnd}} )

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Pubmed编号	文献信息	发表日期	相关基因
14566049	Structure of tRNA pseudouridine synthase TruB and its RNA complex: RNA recognition through a combination of rigid docking and induced fit. Proc. Natl. Acad. Sci. U.S.A. Hu Pan , Sanjay Agarwalla , Demetri T Moustakas , Janet Finer-Moore , Robert M Stroud	2003-10-28	-
12928499	The complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv. tomato DC3000. Proc. Natl. Acad. Sci. U.S.A. C Robin Buell , Vinita Joardar , Magdalen Lindeberg , Jeremy Selengut , Ian T Paulsen , Michelle L Gwinn , Robert J Dodson , Robert T Deboy , A Scott Durkin , James F Kolonay , Ramana Madupu , Sean Daugherty , Lauren Brinkac , Maureen J Beanan , Daniel H Haft , William C Nelson , Tanja Davidsen , Nikhat Zafar , Liwei Zhou , Jia Liu , Qiaoping Yuan , Hoda Khouri , Nadia Fedorova , Bao Tran , Daniel Russell , Kristi Berry , Teresa Utterback , Susan E Van Aken , Tamara V Feldblyum , Mark D'Ascenzo , Wen-Ling Deng , Adela R Ramos , James R Alfano , Samuel Cartinhour , Arun K Chatterjee , Terrence P Delaney , Sondra G Lazarowitz , Gregory B Martin , David J Schneider , Xiaoyan Tang , Carol L Bender , Owen White , Claire M Fraser , Alan Collmer	2003-09-02	dnaA, dnaN, recF, gyrB, PSPTO_0005, PSPTO_0006, PSPTO_0007, PSPTO_0008, PSPTO_0009, PSPTO_0011, PSPTO_0012, PSPTO_0013, PSPTO_0014, PSPTO_0015, PSPTO_0016, PSPTO_0017, PSPTO_0018, PSPTO_0019, PSPTO_0020, PSPTO_0021, PSPTO_0022, PSPTO_0023, PSPTO_0024, PSPTO_0025, PSPTO_0026, PSPTO_0027, PSPTO_0028, PSPTO_0029, PSPTO_0030, PSPTO_0031, PSPTO_0032, PSPTO_0033, PSPTO_0034, PSPTO_0035, PSPTO_0036, PSPTO_0037, PSPTO_0038, PSPTO_0039, PSPTO_0040, PSPTO_0041, PSPTO_0043, hopK1, PSPTO_0045, PSPTO_0046, PSPTO_0047, PSPTO_0048, PSPTO_0049, PSPTO_0050, PSPTO_0051, PSPTO_0052, PSPTO_0053, PSPTO_0054, PSPTO_0055, PSPTO_0056, PSPTO_0057, PSPTO_0058, PSPTO_0059, hopY1, PSPTO_0062, PSPTO_0063, PSPTO_0064, recG, PSPTO_0066, tonB-1, exbD-1, exbB-1, PSPTO_0070, PSPTO_0071, PSPTO_0072, spoT, rpoZ, gmk, PSPTO_0076, rph, PSPTO_0078, PSPTO_0079, pyrE, PSPTO_0081, argB, algC, dut, coaBC, radC, PSPTO_0087, PSPTO_0088, rpmB, rpmG, PSPTO_0091, PSPTO_0092, PSPTO_0093, PSPTO_0094, PSPTO_0095, PSPTO_0096, PSPTO_0097, PSPTO_0098, PSPTO_0099, lrp, dadA, PSPTO_0102
11779468	Cocrystal structure of a tRNA Psi55 pseudouridine synthase: nucleotide flipping by an RNA-modifying enzyme. Cell C Hoang , A R FerrÃ©-D'AmarÃ©	2001-12-28	-

Pubmed编号

文献信息

发表日期

相关基因

14566049

Structure of tRNA pseudouridine synthase TruB and its RNA complex: RNA recognition through a combination of rigid docking and induced fit.

Proc. Natl. Acad. Sci. U.S.A. Hu Pan , Sanjay Agarwalla , Demetri T Moustakas , Janet Finer-Moore , Robert M Stroud

2003-10-28

12928499

The complete genome sequence of the Arabidopsis and tomato pathogen Pseudomonas syringae pv. tomato DC3000.

Proc. Natl. Acad. Sci. U.S.A. C Robin Buell , Vinita Joardar , Magdalen Lindeberg , Jeremy Selengut , Ian T Paulsen , Michelle L Gwinn , Robert J Dodson , Robert T Deboy , A Scott Durkin , James F Kolonay , Ramana Madupu , Sean Daugherty , Lauren Brinkac , Maureen J Beanan , Daniel H Haft , William C Nelson , Tanja Davidsen , Nikhat Zafar , Liwei Zhou , Jia Liu , Qiaoping Yuan , Hoda Khouri , Nadia Fedorova , Bao Tran , Daniel Russell , Kristi Berry , Teresa Utterback , Susan E Van Aken , Tamara V Feldblyum , Mark D'Ascenzo , Wen-Ling Deng , Adela R Ramos , James R Alfano , Samuel Cartinhour , Arun K Chatterjee , Terrence P Delaney , Sondra G Lazarowitz , Gregory B Martin , David J Schneider , Xiaoyan Tang , Carol L Bender , Owen White , Claire M Fraser , Alan Collmer

2003-09-02

dnaA, dnaN, recF, gyrB, PSPTO_0005, PSPTO_0006, PSPTO_0007, PSPTO_0008, PSPTO_0009, PSPTO_0011, PSPTO_0012, PSPTO_0013, PSPTO_0014, PSPTO_0015, PSPTO_0016, PSPTO_0017, PSPTO_0018, PSPTO_0019, PSPTO_0020, PSPTO_0021, PSPTO_0022, PSPTO_0023, PSPTO_0024, PSPTO_0025, PSPTO_0026, PSPTO_0027, PSPTO_0028, PSPTO_0029, PSPTO_0030, PSPTO_0031, PSPTO_0032, PSPTO_0033, PSPTO_0034, PSPTO_0035, PSPTO_0036, PSPTO_0037, PSPTO_0038, PSPTO_0039, PSPTO_0040, PSPTO_0041, PSPTO_0043, hopK1, PSPTO_0045, PSPTO_0046, PSPTO_0047, PSPTO_0048, PSPTO_0049, PSPTO_0050, PSPTO_0051, PSPTO_0052, PSPTO_0053, PSPTO_0054, PSPTO_0055, PSPTO_0056, PSPTO_0057, PSPTO_0058, PSPTO_0059, hopY1, PSPTO_0062, PSPTO_0063, PSPTO_0064, recG, PSPTO_0066, tonB-1, exbD-1, exbB-1, PSPTO_0070, PSPTO_0071, PSPTO_0072, spoT, rpoZ, gmk, PSPTO_0076, rph, PSPTO_0078, PSPTO_0079, pyrE, PSPTO_0081, argB, algC, dut, coaBC, radC, PSPTO_0087, PSPTO_0088, rpmB, rpmG, PSPTO_0091, PSPTO_0092, PSPTO_0093, PSPTO_0094, PSPTO_0095, PSPTO_0096, PSPTO_0097, PSPTO_0098, PSPTO_0099, lrp, dadA, PSPTO_0102

11779468

Cocrystal structure of a tRNA Psi55 pseudouridine synthase: nucleotide flipping by an RNA-modifying enzyme.

2001-12-28

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