| Type | Description |
|---|---|
| Definition | RNA polymerase sigma factor HrpL |
| Date | Results | Publications |
|---|---|---|
| 2017-07-01 10:33:00 | The authors show that association of the RNA polymerase (RNAP)-HrpL complex with the hrpJ promoter element imposes negative autogenous control on hrpL transcription in Pseudomonas syringae pv. tomato DC3000. | 28119474 |
| 2016-03-26 11:44:00 | These results provide new evidence for the roles of non-type III effector genes HrpL, iaaL and matE, belonging to the Pto DC3000 HrpL regulon, in virulence. | 26285820 |
| 2010-01-21 00:00:00 | comprehensive identification of genes that are differentially expressed in wild-type and deltahrpL strains | 17073300 |
| 2010-01-21 00:00:00 | Microarray analysis identified a number of novel hrpL-activated genes with a putative TTSS-independent function. | 16941902 |
| Type | IDs |
|---|---|
| Synonymous | PSPTO1404 |
| Gene |
UniProtKB-ID:
G3XDC4_PSESM,
Q9WWI6_PSEUB
UniprotKB:
G3XDC4,
Q9WWI6
UniParc:
UPI00000087C1
EMBL:
AE016853,
AB016421,
LJRN01000206
EnsemblGenome:
ALO36_02931,
PSPTO_1404
KO:
pst:PSPTO_1404
|
| Nucleutide sequences |
EMBL-CDS:
AAO54926.1,
BAA82036.1,
KPY91220.1
Gene_ORFName:
ALO36_02931
|
| Protein sequencees | |
| Others |
UniRef100:
UniRef100_Q9WWI6
UniRef90:
UniRef90_Q9WWI6
UniRef50:
UniRef50_P37929
|
| {{proteinIndex+1}} | mRNA | Protein | UniprotKB | Description | ||||
|---|---|---|---|---|---|---|---|---|
| Refseq |
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Ensembl: {{protein.nucleotideEnsembl}} |
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||||
| Location | {{protein.contigId}} ( {{protein.positionStart}}..{{protein.positionEnd}} , {{protein.orientation}} ) | |||||||
| Conserved domain | Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
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Region: {{conservedDomain.region == '' || conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' || conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' || conservedDomain.family == null ? "-": conservedDomain.family}} CDD: {{conservedDomain.cdd}} - |
{{conservedDomain.comments == '' || conservedDomain.comments == null ? "-" : conservedDomain.comments }} |
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