LOC101259679 - putative DEAD-Box RNA helicase-BMKCloudï½ç¾è¿å®¢äº

101259679 LOC101259679

基因描述

Type	Description
Definition	putative DEAD-Box RNA helicase

研究结论

Date	Results	Publications
2016-06-08 10:16:00	Two tomato DEAD-box genes, SlDEAD30 and SlDEAD31, which each encodes a putative DEAD-box RNA helicase with all the conserved domains and motifs that are characteristic of DEAD-box proteins have been characterized. SlDEAD30 was highly expressed in roots and mature leaves, and upregulated by NaCl stress. [SlDEAD30]	26241658

名称对应

Type	IDs
Synonymous	SlDEAD30
Gene	UniProtKB-ID: K4CX84_SOLLC UniprotKB: K4CX84 UniParc: UPI000276C769 EMBL: KJ739798 KO: sly:101259679
Nucleutide sequences	EMBL-CDS: AIF32167.1
Protein sequencees	RefSeq: NP_001288209.1
Others	UniRef100: UniRef100_K4CX84 UniRef90: UniRef90_M1ASG6 UniRef50: UniRef50_Q9SA27

全选

{{proteinIndex+1}}	mRNA	Protein	UniprotKB	Description
Refseq	{{protein.nucleotideVersion}} Ensembl: {{protein.nucleotideEnsembl}}	{{protein.proteinVersion}} Ensembl: {{protein.proteinEnsembl}}	{{uniprot}}	Definition: {{{protein.definition}}} Transcript Veriant:{{protein.transcriptVeriant}} Status: {{protein.status}}
Location	( {{protein.positionStart}}..{{protein.positionEnd}} )
Conserved domain	Region: {{conservedDomain.region == '' \|\| conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' \|\| conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' \|\| conservedDomain.family == null ? "-": conservedDomain.family}} CDD:	{{conservedDomain.comments == '' \|\| conservedDomain.comments == null ? "-" : conservedDomain.comments }}	Region: {{conservedDomain.region == '' \|\| conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' \|\| conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' \|\| conservedDomain.family == null ? "-": conservedDomain.family}} CDD:	{{conservedDomain.comments == '' \|\| conservedDomain.comments == null ? "-" : conservedDomain.comments }}

mRNA

Protein

UniprotKB

Description

Refseq

Ensembl: {{protein.nucleotideEnsembl}}

Ensembl: {{protein.proteinEnsembl}}

Definition: {{{protein.definition}}}

Transcript Veriant:{{protein.transcriptVeriant}}

Status: {{protein.status}}

Location

( {{protein.positionStart}}..{{protein.positionEnd}} )

暂无数据

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全选

Pubmed编号	文献信息	发表日期	相关基因
26241658	SlDEAD31, a Putative DEAD-Box RNA Helicase Gene, Regulates Salt and Drought Tolerance and Stress-Related Genes in Tomato. PLoS ONE Mingku Zhu , Guoping Chen , Tingting Dong , Lingling Wang , Jianling Zhang , Zhiping Zhao , Zongli Hu	2015-01-01	-
25249442	Resolution of deep angiosperm phylogeny using conserved nuclear genes and estimates of early divergence times. Nat Commun Liping Zeng , Qiang Zhang , Renran Sun , Hongzhi Kong , Ning Zhang , Hong Ma	2014-01-01	LOC18422635, LOC18424152, LOC18427225, LOC18428361, LOC18431244, LOC18432147, LOC18437438, LOC18437786, LOC18438512, LOC18439386, LOC18440776, MSH1, LOC18445911, LOC18446215, LOC18447434, MLH1, LOC100823747, LOC100824234, LOC100825917, LOC100826130, LOC100826676, LOC100827594, LOC100827907, LOC100828082, LOC100828128, LOC100828379, LOC100829879, LOC100830170, LOC100830239, LOC100830848, LOC100830962, LOC100831346, LOC100832310, LOC100833460, LOC100833758, MSH1, LOC100836212, LOC100836573, LOC100837703, LOC100837874, LOC100840789, LOS4, LOC100842276, LOC100844902, LOC100845473, LOC100846084, LOC100846431, LOC102617116, LOC105763046, LOC105763137, LOC105763583, LOC105764893, LOC105765017, LOC105765281, LOC105766000, LOC105766425, LOC105766670, LOC105766797, LOC105767716, LOC105767738, LOC105768007, LOC105768045, LOC105769280, LOC105769321, LOC105769407, LOC105770073, LOC105770459, LOC105770475, LOC105772603, LOC105773973, LOC105774268, LOC105777517, LOC105777531, LOC105780299, LOC105780542, LOC105782357, LOC105782553, LOC105783131, LOC105783796, LOC105783848, LOC105785308, LOC105786045, LOC105786889, LOC105787440, LOC105787469, LOC105787508, LOC105788596, LOC105788668, LOC105788812, LOC105790162, LOC105790817, LOC105791189, LOC105791465, LOC105792728, LOC105793655, LOC105794824, LOC105795032, LOC105796663, LOC105796976
20350329	Large-scale analysis of full-length cDNAs from the tomato (Solanum lycopersicum) cultivar Micro-Tom, a reference system for the Solanaceae genomics. BMC Genomics Koh Aoki , Kentaro Yano , Ayako Suzuki , Shingo Kawamura , Nozomu Sakurai , Kunihiro Suda , Atsushi Kurabayashi , Tatsuya Suzuki , Taneaki Tsugane , Manabu Watanabe , Kazuhide Ooga , Maiko Torii , Takanori Narita , Tadasu Shin-I , Yuji Kohara , Naoki Yamamoto , Hideki Takahashi , Yuichiro Watanabe , Mayumi Egusa , Motoichiro Kodama , Yuki Ichinose , Mari Kikuchi , Sumire Fukushima , Akiko Okabe , Tsutomu Arie , Yuko Sato , Katsumi Yazawa , Shinobu Satoh , Toshikazu Omura , Hiroshi Ezura , Daisuke Shibata	2010-01-01	CYP85A1, TFIIIA, GRAS4, GRAS6, GRAS10, MBF1a, SRK2C, LOC100037511, EOL1, matriochka, LOC100037732, PHOT1, tbn1, WRKYIId-1, LOC100134875, LOC100134876, SO, LOC100134879, SAMDC, SGS3, MDC, PAR2, ADH, IPI, 5PT4, HSP70, DRM5, LOC100136876, FIE, SD1, CYP707A1, CAS1, LOC100147720, GAD2, SSR1, SSR2, LOC100191110, LOC100191111, LOC100191113, LOC100191114, LOC100191116, LOC100191117, LOC100191118, LOC100191121, TPK1b, LOC100191127, LOC100191128, LOC100191129, GGH1, GGH2, rps16, LOC100191138, SAP1, LOC100301919, LOC100301920, LOC100301921, NAM1, SRG1, CYC1, UBC3, LOC100301935, loxF, MST2, hb-1, LOC100301944, LOC100301981, UBC, GME2, MIOX, LOC100316881, CD2, LOC100316892, PP2C-1, PP2C-2, IMPCHase, LOC100316899, LOC100316901, GME1, PIN4, LOC100529103, LOC100529106, LLP, MAPK5, AP2b, TCP11, CyP, Glb1, PIIGLB1, CHRD, LOC100736441, CYP51, LOC100736452, PAT, LOC100736465, SERK3A, LOC100736468, LOC100736469, LOC100736470, MAPK6

Pubmed编号

文献信息

发表日期

相关基因

26241658

SlDEAD31, a Putative DEAD-Box RNA Helicase Gene, Regulates Salt and Drought Tolerance and Stress-Related Genes in Tomato.

PLoS ONE Mingku Zhu , Guoping Chen , Tingting Dong , Lingling Wang , Jianling Zhang , Zhiping Zhao , Zongli Hu

2015-01-01

25249442

Resolution of deep angiosperm phylogeny using conserved nuclear genes and estimates of early divergence times.

Nat Commun Liping Zeng , Qiang Zhang , Renran Sun , Hongzhi Kong , Ning Zhang , Hong Ma

2014-01-01

LOC18422635, LOC18424152, LOC18427225, LOC18428361, LOC18431244, LOC18432147, LOC18437438, LOC18437786, LOC18438512, LOC18439386, LOC18440776, MSH1, LOC18445911, LOC18446215, LOC18447434, MLH1, LOC100823747, LOC100824234, LOC100825917, LOC100826130, LOC100826676, LOC100827594, LOC100827907, LOC100828082, LOC100828128, LOC100828379, LOC100829879, LOC100830170, LOC100830239, LOC100830848, LOC100830962, LOC100831346, LOC100832310, LOC100833460, LOC100833758, MSH1, LOC100836212, LOC100836573, LOC100837703, LOC100837874, LOC100840789, LOS4, LOC100842276, LOC100844902, LOC100845473, LOC100846084, LOC100846431, LOC102617116, LOC105763046, LOC105763137, LOC105763583, LOC105764893, LOC105765017, LOC105765281, LOC105766000, LOC105766425, LOC105766670, LOC105766797, LOC105767716, LOC105767738, LOC105768007, LOC105768045, LOC105769280, LOC105769321, LOC105769407, LOC105770073, LOC105770459, LOC105770475, LOC105772603, LOC105773973, LOC105774268, LOC105777517, LOC105777531, LOC105780299, LOC105780542, LOC105782357, LOC105782553, LOC105783131, LOC105783796, LOC105783848, LOC105785308, LOC105786045, LOC105786889, LOC105787440, LOC105787469, LOC105787508, LOC105788596, LOC105788668, LOC105788812, LOC105790162, LOC105790817, LOC105791189, LOC105791465, LOC105792728, LOC105793655, LOC105794824, LOC105795032, LOC105796663, LOC105796976

20350329

Large-scale analysis of full-length cDNAs from the tomato (Solanum lycopersicum) cultivar Micro-Tom, a reference system for the Solanaceae genomics.

BMC Genomics Koh Aoki , Kentaro Yano , Ayako Suzuki , Shingo Kawamura , Nozomu Sakurai , Kunihiro Suda , Atsushi Kurabayashi , Tatsuya Suzuki , Taneaki Tsugane , Manabu Watanabe , Kazuhide Ooga , Maiko Torii , Takanori Narita , Tadasu Shin-I , Yuji Kohara , Naoki Yamamoto , Hideki Takahashi , Yuichiro Watanabe , Mayumi Egusa , Motoichiro Kodama , Yuki Ichinose , Mari Kikuchi , Sumire Fukushima , Akiko Okabe , Tsutomu Arie , Yuko Sato , Katsumi Yazawa , Shinobu Satoh , Toshikazu Omura , Hiroshi Ezura , Daisuke Shibata

2010-01-01

CYP85A1, TFIIIA, GRAS4, GRAS6, GRAS10, MBF1a, SRK2C, LOC100037511, EOL1, matriochka, LOC100037732, PHOT1, tbn1, WRKYIId-1, LOC100134875, LOC100134876, SO, LOC100134879, SAMDC, SGS3, MDC, PAR2, ADH, IPI, 5PT4, HSP70, DRM5, LOC100136876, FIE, SD1, CYP707A1, CAS1, LOC100147720, GAD2, SSR1, SSR2, LOC100191110, LOC100191111, LOC100191113, LOC100191114, LOC100191116, LOC100191117, LOC100191118, LOC100191121, TPK1b, LOC100191127, LOC100191128, LOC100191129, GGH1, GGH2, rps16, LOC100191138, SAP1, LOC100301919, LOC100301920, LOC100301921, NAM1, SRG1, CYC1, UBC3, LOC100301935, loxF, MST2, hb-1, LOC100301944, LOC100301981, UBC, GME2, MIOX, LOC100316881, CD2, LOC100316892, PP2C-1, PP2C-2, IMPCHase, LOC100316899, LOC100316901, GME1, PIN4, LOC100529103, LOC100529106, LLP, MAPK5, AP2b, TCP11, CyP, Glb1, PIIGLB1, CHRD, LOC100736441, CYP51, LOC100736452, PAT, LOC100736465, SERK3A, LOC100736468, LOC100736469, LOC100736470, MAPK6

研究热度

热点单位

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热点人员

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