LOC100245178 - E3 ubiquitin-protein ligase RNF5-like-BMKCloudï½ç¾è¿å®¢äº

100245178 LOC100245178

基因描述

Type	Description
Definition	E3 ubiquitin-protein ligase RNF5-like

名称对应

Type	IDs
Gene	UniProtKB-ID: A5B286_VITVI UniprotKB: A5B286 UniParc: UPI0001520041 EMBL: FN596006, AM444057 EnsemblGenome: VIT_03s0063g02050 KO: vvi:100245178
Nucleutide sequences	EMBL-CDS: CCB56953.1, CAN60863.1 Gene_ORFName: VITISV_016726
Protein sequencees	RefSeq: XP_002284651.1
Others	UniRef100: UniRef100_A5B286 UniRef90: UniRef90_A5B286 UniRef50: UniRef50_A0A3Q7IGM2 UniGene: Vvi.12378

全选

{{proteinIndex+1}}	mRNA	Protein	UniprotKB	Description
Refseq	{{protein.nucleotideVersion}} Ensembl: {{protein.nucleotideEnsembl}}	{{protein.proteinVersion}} Ensembl: {{protein.proteinEnsembl}}	{{uniprot}}	Definition: {{{protein.definition}}} Transcript Veriant:{{protein.transcriptVeriant}} Status: {{protein.status}}
Location	( {{protein.positionStart}}..{{protein.positionEnd}} )
Conserved domain	Region: {{conservedDomain.region == '' \|\| conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' \|\| conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' \|\| conservedDomain.family == null ? "-": conservedDomain.family}} CDD:	{{conservedDomain.comments == '' \|\| conservedDomain.comments == null ? "-" : conservedDomain.comments }}	Region: {{conservedDomain.region == '' \|\| conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' \|\| conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' \|\| conservedDomain.family == null ? "-": conservedDomain.family}} CDD:	{{conservedDomain.comments == '' \|\| conservedDomain.comments == null ? "-" : conservedDomain.comments }}

mRNA

Protein

UniprotKB

Description

Refseq

Ensembl: {{protein.nucleotideEnsembl}}

Ensembl: {{protein.proteinEnsembl}}

Definition: {{{protein.definition}}}

Transcript Veriant:{{protein.transcriptVeriant}}

Status: {{protein.status}}

Location

( {{protein.positionStart}}..{{protein.positionEnd}} )

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全选

Pubmed编号	文献信息	发表日期	相关基因
24319081	The high polyphenol content of grapevine cultivar tannat berries is conferred primarily by genes that are not shared with the reference genome. Plant Cell Cecilia Da Silva , Gianpiero Zamperin , Alberto Ferrarini , Andrea Minio , Alessandra Dal Molin , Luca Venturini , Genny Buson , Paola Tononi , Carla Avanzato , Elisa Zago , Eduardo Boido , Eduardo Dellacassa , Carina Gaggero , Mario Pezzotti , Francisco Carrau , Massimo Delledonne	2013-12-01	-
17721507	The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla. Nature Olivier Jaillon , Jean-Marc Aury , Benjamin Noel , Alberto Policriti , Christian Clepet , Alberto Casagrande , Nathalie Choisne , SÃ©bastien Aubourg , Nicola Vitulo , Claire Jubin , Alessandro Vezzi , Fabrice Legeai , Philippe Hugueney , Corinne Dasilva , David Horner , Erica Mica , Delphine Jublot , Julie Poulain , ClÃ©mence BruyÃ¨re , Alain Billault , BÃ©atrice Segurens , Michel Gouyvenoux , Edgardo Ugarte , Federica Cattonaro , VÃ©ronique Anthouard , Virginie Vico , Cristian Del Fabbro , MichaÃ«l Alaux , Gabriele Di Gaspero , Vincent Dumas , Nicoletta Felice , Sophie Paillard , Irena Juman , Marco Moroldo , Simone Scalabrin , AurÃ©lie Canaguier , Isabelle Le Clainche , Giorgio Malacrida , ElÃ©onore Durand , Graziano Pesole , ValÃ©rie Laucou , Philippe Chatelet , Didier Merdinoglu , Massimo Delledonne , Mario Pezzotti , Alain Lecharny , Claude Scarpelli , FranÃ§ois Artiguenave , M Enrico PÃ¨ , Giorgio Valle , Michele Morgante , Michel Caboche , Anne-FranÃ§oise Adam-Blondon , Jean Weissenbach , Francis QuÃ©tier , Patrick Wincker , French-Italian Public Consortium for Grapevine Genome Characterization	2007-09-27	ROMT, STS, SNAP-ALPHA, LOC100232840, TL1, LOC100232842, VVSUC11, VVSUC27, LOC100232847, LOC100232848, ADH1, ADH2, LOC100232855, LOC100232856, LOC100232858, MDH, GCAT, ETR1, LOC100232865, LOC100232866, MADS3, MADS4, LOC100232872, BIG8.1, LOC100232874, BCH1, LOC100232876, LOC100232877, LOC100232878, TL3, P5CS, GRIP28, GRIP31, GRIP21, GRIP24, GRIP61, GFH2, G1, VPP2, X34.1, LOC100232897, LOC100232898, LOC100232901, LOC100232904, LOC100232908, LOC100232909, CHI4C, LOC100232912, LOC100232913, PR6, GST1, LOX, LOC100232919, LOC100232923, LOC100232926, LOC100232927, LOC100232928, LOC100232931, LOC100232932, LOC100232934, LOC100232936, FLS1, LOC100232941, NCED1, ZEP, LOC100232946, MAP3K, HT4, HT5, AP1, VFUL-L, LOC100232954, LOC100232957, LOC100232958, LOC100232960, LOC100232961, LOC100232962, HSP101, HGGT, LOC100232969, HT7, CCD1, LOC100232973, LOC100232975, GST4, HT6, LOC100232980, ANR, LAR1, BR6OX1, LOC100232985, PLD, LOC100232988, FT, MADS8, LOC100232996, LOC100232998, F3'H, PIP1;1
18094749	A high quality draft consensus sequence of the genome of a heterozygous grapevine variety. PLoS ONE Riccardo Velasco , Andrey Zharkikh , Michela Troggio , Dustin A Cartwright , Alessandro Cestaro , Dmitry Pruss , Massimo Pindo , Lisa M Fitzgerald , Silvia Vezzulli , Julia Reid , Giulia Malacarne , Diana Iliev , Giuseppina Coppola , Bryan Wardell , Diego Micheletti , Teresita Macalma , Marco Facci , Jeff T Mitchell , Michele Perazzolli , Glenn Eldredge , Pamela Gatto , Rozan Oyzerski , Marco Moretto , Natalia Gutin , Marco Stefanini , Yang Chen , Cinzia Segala , Christine Davenport , Lorenzo DemattÃ¨ , Amy Mraz , Juri Battilana , Keith Stormo , Fabrizio Costa , Quanzhou Tao , Azeddine Si-Ammour , Tim Harkins , Angie Lackey , Clotilde Perbost , Bruce Taillon , Alessandra Stella , Victor Solovyev , Jeffrey A Fawcett , Lieven Sterck , Klaas Vandepoele , Stella M Grando , Stefano Toppo , Claudio Moser , Jerry Lanchbury , Robert Bogden , Mark Skolnick , Vittorio Sgaramella , Satish K Bhatnagar , Paolo Fontana , Alexander Gutin , Yves Van de Peer , Francesco Salamini , Roberto Viola	2007-01-01	LOC100232855, LOC100232866, CHI4C, PR6, LOC100232924, LOC100232934, AP1, LOC100232954, LOC100232979, LOC100232980, LOC100232985, FT, LOC100232996, PIP1;1, TFL1A, TM6, PIP2;2, TIP2;1, CHI, F3H, PIP2;3, UFGT, ADH3, LOC100233103, MNSOD, SAMDC, LOC100240752, LOC100240756, LOC100240813, LOC100240851, LOC100240928, LOC100240955, LOC100241014, LOC100241091, LOC100241092, LOC100241117, LOC100241149, LOC100241185, LOC100241234, LOC100241243, LOC100241307, LOC100241445, LOC100241454, LOC100241461, LOC100241506, LOC100241519, LOC100241526, LOC100241557, LOC100241574, LOC100241575, LOC100241637, LOC100241640, CIPK03, LOC100241748, LOC100241753, LOC100241778, LOC100241811, LOC100241814, LOC100241835, LOC100241837, LOC100241880, LOC100241887, LOC100241923, LOC100241926, LOC100241950, LOC100242004, LOC100242052, LOC100242123, LOC100242164, LOC100242187, LOC100242196, LOC100242211, LOC100242217, LOC100242255, LOC100242269, LOC100242333, LOC100242343, LOC100242410, LOC100242412, LOC100242564, LOC100242654, LOC100242696, LOC100242701, LOC100242737, LOC100242743, LOC100242809, LOC100242931, LOC100243000, LOC100243004, LOC100243012, LOC100243069, LOC100243118, CIPK07, LOC100243151, LOC100243164, LOC100243199, LOC100243200, LOC100243322, LOC100243360

Pubmed编号

文献信息

发表日期

相关基因

24319081

The high polyphenol content of grapevine cultivar tannat berries is conferred primarily by genes that are not shared with the reference genome.

Plant Cell Cecilia Da Silva , Gianpiero Zamperin , Alberto Ferrarini , Andrea Minio , Alessandra Dal Molin , Luca Venturini , Genny Buson , Paola Tononi , Carla Avanzato , Elisa Zago , Eduardo Boido , Eduardo Dellacassa , Carina Gaggero , Mario Pezzotti , Francisco Carrau , Massimo Delledonne

2013-12-01

17721507

The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla.

Nature Olivier Jaillon , Jean-Marc Aury , Benjamin Noel , Alberto Policriti , Christian Clepet , Alberto Casagrande , Nathalie Choisne , SÃ©bastien Aubourg , Nicola Vitulo , Claire Jubin , Alessandro Vezzi , Fabrice Legeai , Philippe Hugueney , Corinne Dasilva , David Horner , Erica Mica , Delphine Jublot , Julie Poulain , ClÃ©mence BruyÃ¨re , Alain Billault , BÃ©atrice Segurens , Michel Gouyvenoux , Edgardo Ugarte , Federica Cattonaro , VÃ©ronique Anthouard , Virginie Vico , Cristian Del Fabbro , MichaÃ«l Alaux , Gabriele Di Gaspero , Vincent Dumas , Nicoletta Felice , Sophie Paillard , Irena Juman , Marco Moroldo , Simone Scalabrin , AurÃ©lie Canaguier , Isabelle Le Clainche , Giorgio Malacrida , ElÃ©onore Durand , Graziano Pesole , ValÃ©rie Laucou , Philippe Chatelet , Didier Merdinoglu , Massimo Delledonne , Mario Pezzotti , Alain Lecharny , Claude Scarpelli , FranÃ§ois Artiguenave , M Enrico PÃ¨ , Giorgio Valle , Michele Morgante , Michel Caboche , Anne-FranÃ§oise Adam-Blondon , Jean Weissenbach , Francis QuÃ©tier , Patrick Wincker , French-Italian Public Consortium for Grapevine Genome Characterization

2007-09-27

ROMT, STS, SNAP-ALPHA, LOC100232840, TL1, LOC100232842, VVSUC11, VVSUC27, LOC100232847, LOC100232848, ADH1, ADH2, LOC100232855, LOC100232856, LOC100232858, MDH, GCAT, ETR1, LOC100232865, LOC100232866, MADS3, MADS4, LOC100232872, BIG8.1, LOC100232874, BCH1, LOC100232876, LOC100232877, LOC100232878, TL3, P5CS, GRIP28, GRIP31, GRIP21, GRIP24, GRIP61, GFH2, G1, VPP2, X34.1, LOC100232897, LOC100232898, LOC100232901, LOC100232904, LOC100232908, LOC100232909, CHI4C, LOC100232912, LOC100232913, PR6, GST1, LOX, LOC100232919, LOC100232923, LOC100232926, LOC100232927, LOC100232928, LOC100232931, LOC100232932, LOC100232934, LOC100232936, FLS1, LOC100232941, NCED1, ZEP, LOC100232946, MAP3K, HT4, HT5, AP1, VFUL-L, LOC100232954, LOC100232957, LOC100232958, LOC100232960, LOC100232961, LOC100232962, HSP101, HGGT, LOC100232969, HT7, CCD1, LOC100232973, LOC100232975, GST4, HT6, LOC100232980, ANR, LAR1, BR6OX1, LOC100232985, PLD, LOC100232988, FT, MADS8, LOC100232996, LOC100232998, F3'H, PIP1;1

18094749

A high quality draft consensus sequence of the genome of a heterozygous grapevine variety.

PLoS ONE Riccardo Velasco , Andrey Zharkikh , Michela Troggio , Dustin A Cartwright , Alessandro Cestaro , Dmitry Pruss , Massimo Pindo , Lisa M Fitzgerald , Silvia Vezzulli , Julia Reid , Giulia Malacarne , Diana Iliev , Giuseppina Coppola , Bryan Wardell , Diego Micheletti , Teresita Macalma , Marco Facci , Jeff T Mitchell , Michele Perazzolli , Glenn Eldredge , Pamela Gatto , Rozan Oyzerski , Marco Moretto , Natalia Gutin , Marco Stefanini , Yang Chen , Cinzia Segala , Christine Davenport , Lorenzo DemattÃ¨ , Amy Mraz , Juri Battilana , Keith Stormo , Fabrizio Costa , Quanzhou Tao , Azeddine Si-Ammour , Tim Harkins , Angie Lackey , Clotilde Perbost , Bruce Taillon , Alessandra Stella , Victor Solovyev , Jeffrey A Fawcett , Lieven Sterck , Klaas Vandepoele , Stella M Grando , Stefano Toppo , Claudio Moser , Jerry Lanchbury , Robert Bogden , Mark Skolnick , Vittorio Sgaramella , Satish K Bhatnagar , Paolo Fontana , Alexander Gutin , Yves Van de Peer , Francesco Salamini , Roberto Viola

2007-01-01

LOC100232855, LOC100232866, CHI4C, PR6, LOC100232924, LOC100232934, AP1, LOC100232954, LOC100232979, LOC100232980, LOC100232985, FT, LOC100232996, PIP1;1, TFL1A, TM6, PIP2;2, TIP2;1, CHI, F3H, PIP2;3, UFGT, ADH3, LOC100233103, MNSOD, SAMDC, LOC100240752, LOC100240756, LOC100240813, LOC100240851, LOC100240928, LOC100240955, LOC100241014, LOC100241091, LOC100241092, LOC100241117, LOC100241149, LOC100241185, LOC100241234, LOC100241243, LOC100241307, LOC100241445, LOC100241454, LOC100241461, LOC100241506, LOC100241519, LOC100241526, LOC100241557, LOC100241574, LOC100241575, LOC100241637, LOC100241640, CIPK03, LOC100241748, LOC100241753, LOC100241778, LOC100241811, LOC100241814, LOC100241835, LOC100241837, LOC100241880, LOC100241887, LOC100241923, LOC100241926, LOC100241950, LOC100242004, LOC100242052, LOC100242123, LOC100242164, LOC100242187, LOC100242196, LOC100242211, LOC100242217, LOC100242255, LOC100242269, LOC100242333, LOC100242343, LOC100242410, LOC100242412, LOC100242564, LOC100242654, LOC100242696, LOC100242701, LOC100242737, LOC100242743, LOC100242809, LOC100242931, LOC100243000, LOC100243004, LOC100243012, LOC100243069, LOC100243118, CIPK07, LOC100243151, LOC100243164, LOC100243199, LOC100243200, LOC100243322, LOC100243360

研究热度

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