USF1 - upstream transcription factor 1-BMKCloudï½ç¾è¿å®¢äº

100156913 USF1

基因描述

Type	Description
Definition	upstream transcription factor 1

名称对应

Type	IDs
Gene	UniProtKB-ID: F1S178_PIG, A0A4X1VT91_PIG UniprotKB: F1S178, A0A4X1VT91 UniParc: UPI00005A5B45 EMBL: DQIR01238598, AEMK02000022 Ensembl: ENSSSCG00000006371, ENSSSCG00070026420
Nucleutide sequences	EMBL-CDS: HDB94075.1 Ensembl_TRS: ENSSSCT00000006981, ENSSSCT00070052947, ENSSSCT00070052946
Protein sequencees	Ensembl_PRO: ENSSSCP00000006791, ENSSSCP00070044848, ENSSSCP00070044847 RefSeq: XP_020944251.1, XP_020944247.1, NP_001177174.1, XP_020944252.1, XP_013852297.1, XP_020944250.1, XP_020944249.1, XP_020944248.1, XP_013852298.1, XP_005663239.1, XP_013852299.1, XP_020944245.1, XP_005663237.1, XP_020944246.1
Others	UniRef100: UniRef100_A0A4X1VT91 UniRef90: UniRef90_Q61069 UniRef50: UniRef50_P22415 UniGene: Ssc.28096

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{{proteinIndex+1}}	mRNA	Protein	UniprotKB	Description
Refseq	{{protein.nucleotideVersion}} Ensembl: {{protein.nucleotideEnsembl}}	{{protein.proteinVersion}} Ensembl: {{protein.proteinEnsembl}}	{{uniprot}}	Definition: {{{protein.definition}}} Transcript Veriant:{{protein.transcriptVeriant}} Status: {{protein.status}}
Location	( {{protein.positionStart}}..{{protein.positionEnd}} )
Conserved domain	Region: {{conservedDomain.region == '' \|\| conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' \|\| conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' \|\| conservedDomain.family == null ? "-": conservedDomain.family}} CDD:	{{conservedDomain.comments == '' \|\| conservedDomain.comments == null ? "-" : conservedDomain.comments }}	Region: {{conservedDomain.region == '' \|\| conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' \|\| conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' \|\| conservedDomain.family == null ? "-": conservedDomain.family}} CDD:	{{conservedDomain.comments == '' \|\| conservedDomain.comments == null ? "-" : conservedDomain.comments }}

mRNA

Protein

UniprotKB

Description

Refseq

Ensembl: {{protein.nucleotideEnsembl}}

Ensembl: {{protein.proteinEnsembl}}

Definition: {{{protein.definition}}}

Transcript Veriant:{{protein.transcriptVeriant}}

Status: {{protein.status}}

Location

( {{protein.positionStart}}..{{protein.positionEnd}} )

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Pubmed编号	文献信息	发表日期	相关基因
17407547	Porcine transcriptome analysis based on 97 non-normalized cDNA libraries and assembly of 1,021,891 expressed sequence tags. Genome Biol. Jan Gorodkin , Susanna Cirera , Jakob Hedegaard , Michael J Gilchrist , Frank Panitz , Claus JÃ¸rgensen , Karsten Scheibye-Knudsen , Troels Arvin , Steen Lumholdt , Milena Sawera , Trine Green , Bente J Nielsen , Jakob H Havgaard , Carina Rosenkilde , Jun Wang , Heng Li , Ruiqiang Li , Bin Liu , Songnian Hu , Wei Dong , Wei Li , Jun Yu , Jian Wang , Hans-Henrik Staefeldt , Rasmus Wernersson , Lone B Madsen , Bo Thomsen , Henrik HornshÃ¸j , Zhan Bujie , Xuegang Wang , Xuefei Wang , Lars Bolund , SÃ¸ren Brunak , Huanming Yang , Christian Bendixen , Merete Fredholm	2007-01-01	C5AR1, GNAS, CD1D, S100A8, SDCBP, TMOD4, BAZ1A, COL3A1, FHL5, COX6A1, INTS3, RRNAD1, SRSF12, RCSD1, KTN1, POSTN, FRZB, RPP21, PLA2G12B, LUM, PSMF1, ANXA9, SSR1, GPATCH4, LACTB, TCN2, CCDC167, DNAJB11, PPCDC, PLA2G4B, GNPNAT1, PEX2, PFDN6, MRPL44, MTDH, SUDS3, HDDC3, LACTB2, C5H12orf4, MRPL13, GPHN, CARKD, TCEAL2, MTMR11, RCN2, ENY2, AP3S2, SLC7A14, BCAS2, PLEKHA3, CALM1, C7H14orf53, SNAPIN, URM1, NKX2-1, ROMO1, ACKR1, TPST2, DYNC1I2, REG4, CLDND1, DNAJC19, LYSMD1, SNX6, PIGP, EEF1B2, PI16, AP3M1, MRPL15, C7H14orf142, TAGAP, EEF1E1, HYKK, EXTL2, BPIFA3, HNRNPH3, DDT, MRPL40, NHLRC2, GBA2, FAM213A, MTRF1, MCMBP, SNRPF, ASUN, ARPC4, ANXA8, NRN1, ACYP1, LOC100156006, NDUFAF3, ZXDC, TOP2B, DPH3, SERP1, PDE6H, C1H9orf156, LAMTOR2, NCALD
14681463	PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. Nucleic Acids Res. Hirohide Uenishi , Tomoko Eguchi , Kohei Suzuki , Tetsuya Sawazaki , Daisuke Toki , Hiroki Shinkai , Naohiko Okumura , Noriyuki Hamasima , Takashi Awata	2004-01-01	PIK3R6, DESI2, ENPP1, SPARCL1, NREP, SLA-3, IRF7, DYNC1H1, SLA-1, P4HA1, DNMT3A, SEPHS2, SGMS1, CPE, BIN1, TNFRSF1B, SLA-DQB1, CD14, APOBEC3F, PDE4B, KCND3, KCNIP2, UIMC1, LOC100037950, C9, C6, C8A, C8B, C8G, LOC100037957, CAPZA2, CTSB, SEPP1, LOC100037968, SLC7A7, C2H19orf70, ATP5J2, PET100, TOMM7, NDUFC1, SLIRP, LOC100037988, COX6C, COX7C, NDUFV2, PSMB7, RPL10A, RPL14, RPL27, RPS21, RPS26, TMSB10, TPM1, ATPIF1, KLF7, RCHY1, PCD1B, CD1E, SEP15, CCL11, CD72, PVRL2, COX6B, RPS6, CLEC7A, RPL4, EIF4E, LGALS3, SNRPE, ZFAND5, ADSS, SDHD, C5AR1, BTG3, GNA14, NAGS, TNMD, ABCG8, YWHAQ, PGRMC2, CYB561, CNN3, GNAS, RBM39, BRCA1, EDN3, KRT2, HPS4, BLOC1S5, BLOC1S6, RABGGTA, MLPH, ATP7B, CRYZL1, PNPLA3, SRGN, SPTAN1, BIRC6, HPS5

Pubmed编号

文献信息

发表日期

相关基因

17407547

Porcine transcriptome analysis based on 97 non-normalized cDNA libraries and assembly of 1,021,891 expressed sequence tags.

Genome Biol. Jan Gorodkin , Susanna Cirera , Jakob Hedegaard , Michael J Gilchrist , Frank Panitz , Claus JÃ¸rgensen , Karsten Scheibye-Knudsen , Troels Arvin , Steen Lumholdt , Milena Sawera , Trine Green , Bente J Nielsen , Jakob H Havgaard , Carina Rosenkilde , Jun Wang , Heng Li , Ruiqiang Li , Bin Liu , Songnian Hu , Wei Dong , Wei Li , Jun Yu , Jian Wang , Hans-Henrik Staefeldt , Rasmus Wernersson , Lone B Madsen , Bo Thomsen , Henrik HornshÃ¸j , Zhan Bujie , Xuegang Wang , Xuefei Wang , Lars Bolund , SÃ¸ren Brunak , Huanming Yang , Christian Bendixen , Merete Fredholm

2007-01-01

C5AR1, GNAS, CD1D, S100A8, SDCBP, TMOD4, BAZ1A, COL3A1, FHL5, COX6A1, INTS3, RRNAD1, SRSF12, RCSD1, KTN1, POSTN, FRZB, RPP21, PLA2G12B, LUM, PSMF1, ANXA9, SSR1, GPATCH4, LACTB, TCN2, CCDC167, DNAJB11, PPCDC, PLA2G4B, GNPNAT1, PEX2, PFDN6, MRPL44, MTDH, SUDS3, HDDC3, LACTB2, C5H12orf4, MRPL13, GPHN, CARKD, TCEAL2, MTMR11, RCN2, ENY2, AP3S2, SLC7A14, BCAS2, PLEKHA3, CALM1, C7H14orf53, SNAPIN, URM1, NKX2-1, ROMO1, ACKR1, TPST2, DYNC1I2, REG4, CLDND1, DNAJC19, LYSMD1, SNX6, PIGP, EEF1B2, PI16, AP3M1, MRPL15, C7H14orf142, TAGAP, EEF1E1, HYKK, EXTL2, BPIFA3, HNRNPH3, DDT, MRPL40, NHLRC2, GBA2, FAM213A, MTRF1, MCMBP, SNRPF, ASUN, ARPC4, ANXA8, NRN1, ACYP1, LOC100156006, NDUFAF3, ZXDC, TOP2B, DPH3, SERP1, PDE6H, C1H9orf156, LAMTOR2, NCALD

14681463

PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries.

Nucleic Acids Res. Hirohide Uenishi , Tomoko Eguchi , Kohei Suzuki , Tetsuya Sawazaki , Daisuke Toki , Hiroki Shinkai , Naohiko Okumura , Noriyuki Hamasima , Takashi Awata

2004-01-01

PIK3R6, DESI2, ENPP1, SPARCL1, NREP, SLA-3, IRF7, DYNC1H1, SLA-1, P4HA1, DNMT3A, SEPHS2, SGMS1, CPE, BIN1, TNFRSF1B, SLA-DQB1, CD14, APOBEC3F, PDE4B, KCND3, KCNIP2, UIMC1, LOC100037950, C9, C6, C8A, C8B, C8G, LOC100037957, CAPZA2, CTSB, SEPP1, LOC100037968, SLC7A7, C2H19orf70, ATP5J2, PET100, TOMM7, NDUFC1, SLIRP, LOC100037988, COX6C, COX7C, NDUFV2, PSMB7, RPL10A, RPL14, RPL27, RPS21, RPS26, TMSB10, TPM1, ATPIF1, KLF7, RCHY1, PCD1B, CD1E, SEP15, CCL11, CD72, PVRL2, COX6B, RPS6, CLEC7A, RPL4, EIF4E, LGALS3, SNRPE, ZFAND5, ADSS, SDHD, C5AR1, BTG3, GNA14, NAGS, TNMD, ABCG8, YWHAQ, PGRMC2, CYB561, CNN3, GNAS, RBM39, BRCA1, EDN3, KRT2, HPS4, BLOC1S5, BLOC1S6, RABGGTA, MLPH, ATP7B, CRYZL1, PNPLA3, SRGN, SPTAN1, BIRC6, HPS5

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