RTCA - RNA 3'-terminal phosphate cyclase-BMKCloudï½ç¾è¿å®¢äº

100154102 RTCA

基因描述

Type	Description
Definition	RNA 3'-terminal phosphate cyclase

名称对应

Type	IDs
Synonymous	RTCD1
Gene	UniProtKB-ID: F1S564_PIG, A0A4X1TT48_PIG UniprotKB: F1S564, A0A4X1TT48 UniParc: UPI00021D42E4 EMBL: DQIR01323035, DQIR01126939, DQIR01215804, DQIR01205313, AEMK02000025, DQIR01293392 Ensembl: ENSSSCG00000006865, ENSSSCG00070011435 KO: ssc:100154102
Nucleutide sequences	EMBL-CDS: HDB71281.1, HDC78509.1, HDA82415.1, HDB60790.1, HDC48870.1 Ensembl_TRS: ENSSSCT00000007518, ENSSSCT00070022283
Protein sequencees	Ensembl_PRO: ENSSSCP00000007319, ENSSSCP00070018448 RefSeq: NP_001230399.1
Others	UniRef100: UniRef100_F1S564 UniRef90: UniRef90_Q2HJ88 UniRef50: UniRef50_Q2HJ88 UniGene: Ssc.25999

全选

{{proteinIndex+1}}	mRNA	Protein	UniprotKB	Description
Refseq	{{protein.nucleotideVersion}} Ensembl: {{protein.nucleotideEnsembl}}	{{protein.proteinVersion}} Ensembl: {{protein.proteinEnsembl}}	{{uniprot}}	Definition: {{{protein.definition}}} Transcript Veriant:{{protein.transcriptVeriant}} Status: {{protein.status}}
Location	( {{protein.positionStart}}..{{protein.positionEnd}} )
Conserved domain	Region: {{conservedDomain.region == '' \|\| conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' \|\| conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' \|\| conservedDomain.family == null ? "-": conservedDomain.family}} CDD:	{{conservedDomain.comments == '' \|\| conservedDomain.comments == null ? "-" : conservedDomain.comments }}	Region: {{conservedDomain.region == '' \|\| conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' \|\| conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' \|\| conservedDomain.family == null ? "-": conservedDomain.family}} CDD:	{{conservedDomain.comments == '' \|\| conservedDomain.comments == null ? "-" : conservedDomain.comments }}

mRNA

Protein

UniprotKB

Description

Refseq

Ensembl: {{protein.nucleotideEnsembl}}

Ensembl: {{protein.proteinEnsembl}}

Definition: {{{protein.definition}}}

Transcript Veriant:{{protein.transcriptVeriant}}

Status: {{protein.status}}

Location

( {{protein.positionStart}}..{{protein.positionEnd}} )

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Pubmed编号	文献信息	发表日期	相关基因
17145712	PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences. Nucleic Acids Res. Hirohide Uenishi , Tomoko Eguchi-Ogawa , Hiroki Shinkai , Naohiko Okumura , Kohei Suzuki , Daisuke Toki , Noriyuki Hamasima , Takashi Awata	2007-01-01	SPARCL1, SLA-3, DYNC1H1, SLA-1, P4HA1, DNMT3A, CPE, TNFRSF1B, SLA-DQB1, CD14, APOBEC3F, PDE4B, KCND3, KCNIP2, UIMC1, C9, C8A, C8G, SEPP1, LOC100037968, SLC7A7, PET100, TOMM7, NDUFC1, SLIRP, LOC100037988, COX6C, COX7C, NDUFV2, PSMB7, RPL10A, RPL14, RPL27, RPS21, TMSB10, ATPIF1, RCHY1, CD1E, SEP15, CCL11, CD72, COX6B, RPL4, EIF4E, LGALS3, SNRPE, ZFAND5, SDHD, C5AR1, ABCG8, CYB561, GNAS, RBM39, BRCA1, KRT2, HPS4, BLOC1S5, BLOC1S6, PNPLA3, SRGN, SPTAN1, BIRC6, HPS5, AMPD1, MMP12, MYOT, COL6A3, EIF4E2, PPP2R5A, IFIH1, EIF4A2, EIF4A1, SQLE, CYP39A1, ALG2, BPIFB2, BPIFB5, CYP4F2, SLC44A4, DXO, NIFK, CD1D, SNCG, LNPEP, MUC13, COPS5, SIRT2, SIRT3, RBM38, ANGPTL2, STC2, AQP4, LASS6, CD302, CYP3A46, KRT18, PEX6, CNPY3, MEA1
15679890	Comparative analysis of protein coding sequences from human, mouse and the domesticated pig. BMC Biol. Frank GrÃ¸nlund JÃ¸rgensen , Asger Hobolth , Henrik HornshÃ¸j , Christian Bendixen , Merete Fredholm , Mikkel Heide Schierup	2005-01-01	NREP, P4HA1, LOC100037988, RPL14, RPL27, RPS26, SNRPE, EIF4E2, ACOX1, COPS5, COPS2, COPS4, CD302, CNPY3, GATM, SUMO1, LMO4, HNRNPAB, SMNDC1, CAPZB, PRELID3B, AIMP1, SPCS1, DEGS1, H2AFZ, RPL7L1, PON2, HEXA, UCHL5, RAB34, RAB5A, RNF5, PHGDH, ITLN2, TMCO1, TAF11, RAB2A, VIMP, SDCBP, ARV1, PMP2, MRPL2, TPD52, AIG1, C1H15orf61, LOC100152047, ENPP6, COMMD4, POLR3GL, PLEKHO1, SSB, CMSS1, AGA, CUTA, PEX7, COX6A1, PMVK, MTERF3, CD53, FRZB, PEA15, ERH, TMEM242, CTHRC1, MED6, FAM162B, FAM204A, PDZK1, DPCD, HAUS1, COQ10B, BNIP3L, SSR1, MRPS28, SDC2, DHRS7, TOMM20, DNAJB11, BZW1, CXHXorf56, GNPNAT1, BOLA1, PDCD7, PFDN6, LOC100153062, DTWD1, UBE2C, STK16, DNPEP, ARPC2, SIT1, STX7, WDR61, PPP6C, TIPIN, MYF5, MRPL13, CHCHD1, EAPP
14681463	PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. Nucleic Acids Res. Hirohide Uenishi , Tomoko Eguchi , Kohei Suzuki , Tetsuya Sawazaki , Daisuke Toki , Hiroki Shinkai , Naohiko Okumura , Noriyuki Hamasima , Takashi Awata	2004-01-01	PIK3R6, DESI2, ENPP1, SPARCL1, NREP, SLA-3, IRF7, DYNC1H1, SLA-1, P4HA1, DNMT3A, SEPHS2, SGMS1, CPE, BIN1, TNFRSF1B, SLA-DQB1, CD14, APOBEC3F, PDE4B, KCND3, KCNIP2, UIMC1, LOC100037950, C9, C6, C8A, C8B, C8G, LOC100037957, CAPZA2, CTSB, SEPP1, LOC100037968, SLC7A7, C2H19orf70, ATP5J2, PET100, TOMM7, NDUFC1, SLIRP, LOC100037988, COX6C, COX7C, NDUFV2, PSMB7, RPL10A, RPL14, RPL27, RPS21, RPS26, TMSB10, TPM1, ATPIF1, KLF7, RCHY1, PCD1B, CD1E, SEP15, CCL11, CD72, PVRL2, COX6B, RPS6, CLEC7A, RPL4, EIF4E, LGALS3, SNRPE, ZFAND5, ADSS, SDHD, C5AR1, BTG3, GNA14, NAGS, TNMD, ABCG8, YWHAQ, PGRMC2, CYB561, CNN3, GNAS, RBM39, BRCA1, EDN3, KRT2, HPS4, BLOC1S5, BLOC1S6, RABGGTA, MLPH, ATP7B, CRYZL1, PNPLA3, SRGN, SPTAN1, BIRC6, HPS5

Pubmed编号

文献信息

发表日期

相关基因

17145712

PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences.

Nucleic Acids Res. Hirohide Uenishi , Tomoko Eguchi-Ogawa , Hiroki Shinkai , Naohiko Okumura , Kohei Suzuki , Daisuke Toki , Noriyuki Hamasima , Takashi Awata

2007-01-01

SPARCL1, SLA-3, DYNC1H1, SLA-1, P4HA1, DNMT3A, CPE, TNFRSF1B, SLA-DQB1, CD14, APOBEC3F, PDE4B, KCND3, KCNIP2, UIMC1, C9, C8A, C8G, SEPP1, LOC100037968, SLC7A7, PET100, TOMM7, NDUFC1, SLIRP, LOC100037988, COX6C, COX7C, NDUFV2, PSMB7, RPL10A, RPL14, RPL27, RPS21, TMSB10, ATPIF1, RCHY1, CD1E, SEP15, CCL11, CD72, COX6B, RPL4, EIF4E, LGALS3, SNRPE, ZFAND5, SDHD, C5AR1, ABCG8, CYB561, GNAS, RBM39, BRCA1, KRT2, HPS4, BLOC1S5, BLOC1S6, PNPLA3, SRGN, SPTAN1, BIRC6, HPS5, AMPD1, MMP12, MYOT, COL6A3, EIF4E2, PPP2R5A, IFIH1, EIF4A2, EIF4A1, SQLE, CYP39A1, ALG2, BPIFB2, BPIFB5, CYP4F2, SLC44A4, DXO, NIFK, CD1D, SNCG, LNPEP, MUC13, COPS5, SIRT2, SIRT3, RBM38, ANGPTL2, STC2, AQP4, LASS6, CD302, CYP3A46, KRT18, PEX6, CNPY3, MEA1

15679890

Comparative analysis of protein coding sequences from human, mouse and the domesticated pig.

BMC Biol. Frank GrÃ¸nlund JÃ¸rgensen , Asger Hobolth , Henrik HornshÃ¸j , Christian Bendixen , Merete Fredholm , Mikkel Heide Schierup

2005-01-01

NREP, P4HA1, LOC100037988, RPL14, RPL27, RPS26, SNRPE, EIF4E2, ACOX1, COPS5, COPS2, COPS4, CD302, CNPY3, GATM, SUMO1, LMO4, HNRNPAB, SMNDC1, CAPZB, PRELID3B, AIMP1, SPCS1, DEGS1, H2AFZ, RPL7L1, PON2, HEXA, UCHL5, RAB34, RAB5A, RNF5, PHGDH, ITLN2, TMCO1, TAF11, RAB2A, VIMP, SDCBP, ARV1, PMP2, MRPL2, TPD52, AIG1, C1H15orf61, LOC100152047, ENPP6, COMMD4, POLR3GL, PLEKHO1, SSB, CMSS1, AGA, CUTA, PEX7, COX6A1, PMVK, MTERF3, CD53, FRZB, PEA15, ERH, TMEM242, CTHRC1, MED6, FAM162B, FAM204A, PDZK1, DPCD, HAUS1, COQ10B, BNIP3L, SSR1, MRPS28, SDC2, DHRS7, TOMM20, DNAJB11, BZW1, CXHXorf56, GNPNAT1, BOLA1, PDCD7, PFDN6, LOC100153062, DTWD1, UBE2C, STK16, DNPEP, ARPC2, SIT1, STX7, WDR61, PPP6C, TIPIN, MYF5, MRPL13, CHCHD1, EAPP

14681463

PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries.

Nucleic Acids Res. Hirohide Uenishi , Tomoko Eguchi , Kohei Suzuki , Tetsuya Sawazaki , Daisuke Toki , Hiroki Shinkai , Naohiko Okumura , Noriyuki Hamasima , Takashi Awata

2004-01-01

PIK3R6, DESI2, ENPP1, SPARCL1, NREP, SLA-3, IRF7, DYNC1H1, SLA-1, P4HA1, DNMT3A, SEPHS2, SGMS1, CPE, BIN1, TNFRSF1B, SLA-DQB1, CD14, APOBEC3F, PDE4B, KCND3, KCNIP2, UIMC1, LOC100037950, C9, C6, C8A, C8B, C8G, LOC100037957, CAPZA2, CTSB, SEPP1, LOC100037968, SLC7A7, C2H19orf70, ATP5J2, PET100, TOMM7, NDUFC1, SLIRP, LOC100037988, COX6C, COX7C, NDUFV2, PSMB7, RPL10A, RPL14, RPL27, RPS21, RPS26, TMSB10, TPM1, ATPIF1, KLF7, RCHY1, PCD1B, CD1E, SEP15, CCL11, CD72, PVRL2, COX6B, RPS6, CLEC7A, RPL4, EIF4E, LGALS3, SNRPE, ZFAND5, ADSS, SDHD, C5AR1, BTG3, GNA14, NAGS, TNMD, ABCG8, YWHAQ, PGRMC2, CYB561, CNN3, GNAS, RBM39, BRCA1, EDN3, KRT2, HPS4, BLOC1S5, BLOC1S6, RABGGTA, MLPH, ATP7B, CRYZL1, PNPLA3, SRGN, SPTAN1, BIRC6, HPS5

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