RAB35 - RAB35, member RAS oncogene family-BMKCloudï½ç¾è¿å®¢äº

100151805 RAB35

基因描述

Type	Description
Definition	RAB35, member RAS oncogene family

研究结论

Date	Results	Publications
2020-05-02 12:05:00	a genome-wide association study revealed that INPPL1, FAM3C and RAB35 may have roles in backfat thickness at 100 kg and loin muscle thickness in domestic pigs	31100035

名称对应

Type	IDs
Gene	UniProtKB-ID: A0A287BFE6_PIG, A0A4X1T9K3_PIG UniprotKB: A0A287BFE6, A0A4X1T9K3 UniParc: UPI000000126C EMBL: AEMK02000096 Ensembl: ENSSSCG00000033876, ENSSSCG00070007563 KO: ssc:100151805
Nucleutide sequences	Ensembl_TRS: ENSSSCT00000051638, ENSSSCT00070014623
Protein sequencees	Ensembl_PRO: ENSSSCP00000054851, ENSSSCP00070012080 RefSeq: NP_001230220.1
Others	UniRef100: UniRef100_Q15286 UniRef90: UniRef90_Q15286 UniRef50: UniRef50_Q15286 UniGene: Ssc.17391, Ssc.99380

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{{proteinIndex+1}}	mRNA	Protein	UniprotKB	Description
Refseq	{{protein.nucleotideVersion}} Ensembl: {{protein.nucleotideEnsembl}}	{{protein.proteinVersion}} Ensembl: {{protein.proteinEnsembl}}	{{uniprot}}	Definition: {{{protein.definition}}} Transcript Veriant:{{protein.transcriptVeriant}} Status: {{protein.status}}
Location	( {{protein.positionStart}}..{{protein.positionEnd}} )
Conserved domain	Region: {{conservedDomain.region == '' \|\| conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' \|\| conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' \|\| conservedDomain.family == null ? "-": conservedDomain.family}} CDD:	{{conservedDomain.comments == '' \|\| conservedDomain.comments == null ? "-" : conservedDomain.comments }}	Region: {{conservedDomain.region == '' \|\| conservedDomain.region == null ? "-": conservedDomain.region}} GFID: {{conservedDomain.gfid == '' \|\| conservedDomain.gfid == null ? "-": conservedDomain.gfid}} Family: {{conservedDomain.family == '' \|\| conservedDomain.family == null ? "-": conservedDomain.family}} CDD:	{{conservedDomain.comments == '' \|\| conservedDomain.comments == null ? "-" : conservedDomain.comments }}

mRNA

Protein

UniprotKB

Description

Refseq

Ensembl: {{protein.nucleotideEnsembl}}

Ensembl: {{protein.proteinEnsembl}}

Definition: {{{protein.definition}}}

Transcript Veriant:{{protein.transcriptVeriant}}

Status: {{protein.status}}

Location

( {{protein.positionStart}}..{{protein.positionEnd}} )

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Pubmed编号	文献信息	发表日期	相关基因
31100035	Genome-wide association study for backfat thickness at 100 kg and loin muscle thickness in domestic pigs based on genotyping by sequencing. Physiol. Genomics Dejuan Chen , Pingxian Wu , Qiang Yang , Kai Wang , Jie Zhou , Xidi Yang , Anan Jiang , Linyuan Shen , Weihang Xiao , Yanzhi Jiang , Li Zhu , Xuewei Li , Guoqing Tang	2019-07-01	-
14681463	PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. Nucleic Acids Res. Hirohide Uenishi , Tomoko Eguchi , Kohei Suzuki , Tetsuya Sawazaki , Daisuke Toki , Hiroki Shinkai , Naohiko Okumura , Noriyuki Hamasima , Takashi Awata	2004-01-01	PIK3R6, DESI2, ENPP1, SPARCL1, NREP, SLA-3, IRF7, DYNC1H1, SLA-1, P4HA1, DNMT3A, SEPHS2, SGMS1, CPE, BIN1, TNFRSF1B, SLA-DQB1, CD14, APOBEC3F, PDE4B, KCND3, KCNIP2, UIMC1, LOC100037950, C9, C6, C8A, C8B, C8G, LOC100037957, CAPZA2, CTSB, SEPP1, LOC100037968, SLC7A7, C2H19orf70, ATP5J2, PET100, TOMM7, NDUFC1, SLIRP, LOC100037988, COX6C, COX7C, NDUFV2, PSMB7, RPL10A, RPL14, RPL27, RPS21, RPS26, TMSB10, TPM1, ATPIF1, KLF7, RCHY1, PCD1B, CD1E, SEP15, CCL11, CD72, PVRL2, COX6B, RPS6, CLEC7A, RPL4, EIF4E, LGALS3, SNRPE, ZFAND5, ADSS, SDHD, C5AR1, BTG3, GNA14, NAGS, TNMD, ABCG8, YWHAQ, PGRMC2, CYB561, CNN3, GNAS, RBM39, BRCA1, EDN3, KRT2, HPS4, BLOC1S5, BLOC1S6, RABGGTA, MLPH, ATP7B, CRYZL1, PNPLA3, SRGN, SPTAN1, BIRC6, HPS5
12226715	Porcine gene discovery by normalized cDNA-library sequencing and EST cluster assembly. Mamm. Genome Scott C Fahrenkrug , Timothy P L Smith , Brad A Freking , Jennifer Cho , Joseph White , Jeff Vallet , Tommy Wise , Gary Rohrer , Geo Pertea , Razvan Sultana , John Quackenbush , John W Keele	2002-08-01	C5AR1, ZC4H2, RAB35, VIMP, INTS3, SRSF12, LRRC6, TMEM242, STAMBPL1, SMOX, VPS37B, PLA2G4B, NTMT1, SNAPIN, NKX2-1, ACKR1, SCAMP2, PIGP, EEF1E1, PLAC9, EXTL2, SPRTN, ZXDC, LHPP, TMEM26, DNTTIP2, UBL7, ARL6IP4, HABP2, TXN2, HSBP1L1, C7H6orf52, PHKG2, SRRM2, HDAC3, CLMN, IL27RA, SLC25A15, CDIP1, MXD3, ANKHD1, LIN7B, SMARCD2, SLC51A, TPRG1L, ZNF346, NUCB1, P2RY6, FOXRED2, FAM216A, NKG7, TMEM80, NME3, AP2S1, ICMT, ZER1, NELFB, CMTM5, SBF1, LMF2, C1QB, SELO, LOC100519311, PCDH7, PIP4K2A, DPM2, CDH11, JMJD7, GAP43, NFATC2IP, TMEM51, THOC6, SLC41A1, PAMR1, SLC38A5, VPS4A, DHCR24, PMCH, PCK2

Pubmed编号

文献信息

发表日期

相关基因

31100035

Genome-wide association study for backfat thickness at 100 kg and loin muscle thickness in domestic pigs based on genotyping by sequencing.

Physiol. Genomics Dejuan Chen , Pingxian Wu , Qiang Yang , Kai Wang , Jie Zhou , Xidi Yang , Anan Jiang , Linyuan Shen , Weihang Xiao , Yanzhi Jiang , Li Zhu , Xuewei Li , Guoqing Tang

2019-07-01

14681463

PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries.

Nucleic Acids Res. Hirohide Uenishi , Tomoko Eguchi , Kohei Suzuki , Tetsuya Sawazaki , Daisuke Toki , Hiroki Shinkai , Naohiko Okumura , Noriyuki Hamasima , Takashi Awata

2004-01-01

PIK3R6, DESI2, ENPP1, SPARCL1, NREP, SLA-3, IRF7, DYNC1H1, SLA-1, P4HA1, DNMT3A, SEPHS2, SGMS1, CPE, BIN1, TNFRSF1B, SLA-DQB1, CD14, APOBEC3F, PDE4B, KCND3, KCNIP2, UIMC1, LOC100037950, C9, C6, C8A, C8B, C8G, LOC100037957, CAPZA2, CTSB, SEPP1, LOC100037968, SLC7A7, C2H19orf70, ATP5J2, PET100, TOMM7, NDUFC1, SLIRP, LOC100037988, COX6C, COX7C, NDUFV2, PSMB7, RPL10A, RPL14, RPL27, RPS21, RPS26, TMSB10, TPM1, ATPIF1, KLF7, RCHY1, PCD1B, CD1E, SEP15, CCL11, CD72, PVRL2, COX6B, RPS6, CLEC7A, RPL4, EIF4E, LGALS3, SNRPE, ZFAND5, ADSS, SDHD, C5AR1, BTG3, GNA14, NAGS, TNMD, ABCG8, YWHAQ, PGRMC2, CYB561, CNN3, GNAS, RBM39, BRCA1, EDN3, KRT2, HPS4, BLOC1S5, BLOC1S6, RABGGTA, MLPH, ATP7B, CRYZL1, PNPLA3, SRGN, SPTAN1, BIRC6, HPS5

12226715

Porcine gene discovery by normalized cDNA-library sequencing and EST cluster assembly.

Mamm. Genome Scott C Fahrenkrug , Timothy P L Smith , Brad A Freking , Jennifer Cho , Joseph White , Jeff Vallet , Tommy Wise , Gary Rohrer , Geo Pertea , Razvan Sultana , John Quackenbush , John W Keele

2002-08-01

C5AR1, ZC4H2, RAB35, VIMP, INTS3, SRSF12, LRRC6, TMEM242, STAMBPL1, SMOX, VPS37B, PLA2G4B, NTMT1, SNAPIN, NKX2-1, ACKR1, SCAMP2, PIGP, EEF1E1, PLAC9, EXTL2, SPRTN, ZXDC, LHPP, TMEM26, DNTTIP2, UBL7, ARL6IP4, HABP2, TXN2, HSBP1L1, C7H6orf52, PHKG2, SRRM2, HDAC3, CLMN, IL27RA, SLC25A15, CDIP1, MXD3, ANKHD1, LIN7B, SMARCD2, SLC51A, TPRG1L, ZNF346, NUCB1, P2RY6, FOXRED2, FAM216A, NKG7, TMEM80, NME3, AP2S1, ICMT, ZER1, NELFB, CMTM5, SBF1, LMF2, C1QB, SELO, LOC100519311, PCDH7, PIP4K2A, DPM2, CDH11, JMJD7, GAP43, NFATC2IP, TMEM51, THOC6, SLC41A1, PAMR1, SLC38A5, VPS4A, DHCR24, PMCH, PCK2

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