Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database.

BMC Genomics     Jeremy Pasquier , Cédric Cabau , Thaovi Nguyen , Elodie Jouanno , Dany Severac , Ingo Braasch , Laurent Journot , Pierre Pontarotti , Christophe Klopp , John H Postlethwait , Yann Guiguen , Julien Bobe

A novel test for recessive contributions to complex diseases implicates Bardet-Biedl syndrome gene BBS10 in idiopathic type 2 diabetes and obesity.

Am J Hum Genet     Elaine T Lim , Yangfan P Liu , Yingleong Chan , Tuomi Tiinamaija , AnnMari Käräjämäki , Erik Madsen , Go-T2D Consortium , David M Altshuler , Soumya Raychaudhuri , Leif Groop , Jason Flannick , Joel N Hirschhorn , Nicholas Katsanis , Mark J Daly

Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium.

Brief. Bioinformatics     Pascale Gaudet , Michael S Livstone , Suzanna E Lewis , Paul D Thomas

TTC21B contributes both causal and modifying alleles across the ciliopathy spectrum.

Nat Genet     Erica E Davis , Qi Zhang , Qin Liu , Bill H Diplas , Lisa M Davey , Jane Hartley , Corinne Stoetzel , Katarzyna Szymanska , Gokul Ramaswami , Clare V Logan , Donna M Muzny , Alice C Young , David A Wheeler , Pedro Cruz , Margaret Morgan , Lora R Lewis , Praveen Cherukuri , Baishali Maskeri , Nancy F Hansen , James C Mullikin , Robert W Blakesley , Gerard G Bouffard , NISC Comparative Sequencing Program , Gabor Gyapay , Susanne Rieger , Burkhard Tönshoff , Ilse Kern , Neveen A Soliman , Thomas J Neuhaus , Kathryn J Swoboda , Hulya Kayserili , Tomas E Gallagher , Richard A Lewis , Carsten Bergmann , Edgar A Otto , Sophie Saunier , Peter J Scambler , Philip L Beales , Joseph G Gleeson , Eamonn R Maher , Tania Attié-Bitach , Hélène Dollfus , Colin A Johnson , Eric D Green , Richard A Gibbs , Friedhelm Hildebrandt , Eric A Pierce , Nicholas Katsanis

Functional analyses of variants reveal a significant role for dominant negative and common alleles in oligogenic Bardet-Biedl syndrome.

Proc Natl Acad Sci U S A     Norann A Zaghloul , Yangjian Liu , Jantje M Gerdes , Cecilia Gascue , Edwin C Oh , Carmen C Leitch , Yana Bromberg , Jonathan Binkley , Rudolph L Leibel , Arend Sidow , Jose L Badano , Nicholas Katsanis

Genetic interaction between Bardet-Biedl syndrome genes and implications for limb patterning.

Hum. Mol. Genet.     Marwan K Tayeh , Hsan-Jan Yen , John S Beck , Charles C Searby , Trudi A Westfall , Hilary Griesbach , Val C Sheffield , Diane C Slusarski

Identification of a novel BBS gene (BBS12) highlights the major role of a vertebrate-specific branch of chaperonin-related proteins in Bardet-Biedl syndrome.

Am. J. Hum. Genet.     Corinne Stoetzel , Jean Muller , Virginie Laurier , Erica E Davis , Norann A Zaghloul , Serge Vicaire , Cecile Jacquelin , Frederic Plewniak , Carmen C Leitch , Pierre Sarda , Christian Hamel , Thomy J L de Ravel , Richard Alan Lewis , Evelyne Friederich , Christelle Thibault , Jean-Marc Danse , Alain Verloes , Dominique Bonneau , Nicholas Katsanis , Olivier Poch , Jean-Louis Mandel , Helene Dollfus

BBS10 encodes a vertebrate-specific chaperonin-like protein and is a major BBS locus.

Nat. Genet.     Corinne Stoetzel , Virginie Laurier , Erica E Davis , Jean Muller , Suzanne Rix , José L Badano , Carmen C Leitch , Nabiha Salem , Eliane Chouery , Sandra Corbani , Nadine Jalk , Serge Vicaire , Pierre Sarda , Christian Hamel , Didier Lacombe , Muriel Holder , Sylvie Odent , Susan Holder , Alice S Brooks , Nursel H Elcioglu , Eduardo D Silva , Eduardo Da Silva , Béatrice Rossillion , Sabine Sigaudy , Thomy J L de Ravel , Richard Alan Lewis , Bruno Leheup , Alain Verloes , Patrizia Amati-Bonneau , André Mégarbané , Olivier Poch , Dominique Bonneau , Philip L Beales , Jean-Louis Mandel , Nicholas Katsanis , Hélène Dollfus

15000 unique zebrafish EST clusters and their future use in microarray for profiling gene expression patterns during embryogenesis.

Genome Res.     Jane Lo , Sorcheng Lee , Min Xu , Feng Liu , Hua Ruan , Alvin Eun , Yawen He , Weiping Ma , Weefuen Wang , Zilong Wen , Jinrong Peng

Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences.

Proc. Natl. Acad. Sci. U.S.A.     Robert L Strausberg , Elise A Feingold , Lynette H Grouse , Jeffery G Derge , Richard D Klausner , Francis S Collins , Lukas Wagner , Carolyn M Shenmen , Gregory D Schuler , Stephen F Altschul , Barry Zeeberg , Kenneth H Buetow , Carl F Schaefer , Narayan K Bhat , Ralph F Hopkins , Heather Jordan , Troy Moore , Steve I Max , Jun Wang , Florence Hsieh , Luda Diatchenko , Kate Marusina , Andrew A Farmer , Gerald M Rubin , Ling Hong , Mark Stapleton , M Bento Soares , Maria F Bonaldo , Tom L Casavant , Todd E Scheetz , Michael J Brownstein , Ted B Usdin , Shiraki Toshiyuki , Piero Carninci , Christa Prange , Sam S Raha , Naomi A Loquellano , Garrick J Peters , Rick D Abramson , Sara J Mullahy , Stephanie A Bosak , Paul J McEwan , Kevin J McKernan , Joel A Malek , Preethi H Gunaratne , Stephen Richards , Kim C Worley , Sarah Hale , Angela M Garcia , Laura J Gay , Stephen W Hulyk , Debbie K Villalon , Donna M Muzny , Erica J Sodergren , Xiuhua Lu , Richard A Gibbs , Jessica Fahey , Erin Helton , Mark Ketteman , Anuradha Madan , Stephanie Rodrigues , Amy Sanchez , Michelle Whiting , Anup Madan , Alice C Young , Yuriy Shevchenko , Gerard G Bouffard , Robert W Blakesley , Jeffrey W Touchman , Eric D Green , Mark C Dickson , Alex C Rodriguez , Jane Grimwood , Jeremy Schmutz , Richard M Myers , Yaron S N Butterfield , Martin I Krzywinski , Ursula Skalska , Duane E Smailus , Angelique Schnerch , Jacqueline E Schein , Steven J M Jones , Marco A Marra , Mammalian Gene Collection Program Team