例如:"lncRNA", "apoptosis", "WRKY"

Prp5-Spt8/Spt3 interaction mediates a reciprocal coupling between splicing and transcription.

Nucleic Acids Res. 2020 Jun 19;48(11):5799-5813
Wei Shao 1 , Zhan Ding 2 , Zeng-Zhang Zheng 2 , Ji-Jia Shen 3 , Yu-Xian Shen 3 , Jia Pu 2 , Yu-Jie Fan 1 , Charles C Query 4 , Yong-Zhen Xu 1
Wei Shao 1 , Zhan Ding 2 , Zeng-Zhang Zheng 2 , Ji-Jia Shen 3 , Yu-Xian Shen 3 , Jia Pu 2 , Yu-Jie Fan 1 , Charles C Query 4 , Yong-Zhen Xu 1
+ et al

[No authors listed]

Author information
  • 1 State Key Laboratory of Virology, Hubei Key Laboratory of Cell Homeostasis, College of Life Science, Wuhan University, Wuhan, Hubei 430072, China.
  • 2 Key Laboratory of Insect Developmental and Evolutionary Biology, Institute of Plant Physiology and Ecology, Chinese Academy of Sciences, Shanghai 200032, China.
  • 3 School of Basic Medical Sciences, Anhui Medical University, Hefei, Anhui 230032, China.
  • 4 Department of Cell Biology, Albert Einstein College of Medicine, NY 10461, USA.

摘要


Transcription and pre-mRNA splicing are coupled to promote gene expression and regulation. However, mechanisms by which transcription and splicing influence each other are still under investigation. The ATPase Prp5p is required for pre-spliceosome assembly and splicing proofreading at the branch-point region. From an open UV mutagenesis screen for genetic suppressors of prp5 defects and subsequent targeted testing, we identify components of the TBP-binding module of the Spt-Ada-Gcn5 Acetyltransferase (SAGA) complex, Spt8p and Spt3p. Spt8Δ and spt3Δ rescue the cold-sensitivity of prp5-GAR allele, and prp5 mutants restore growth of spt8Δ and spt3Δ strains on 6-azauracil. By chromatin immunoprecipitation (ChIP), we find that prp5 alleles decrease recruitment of RNA polymerase II (Pol II) to an intron-containing gene, which is rescued by spt8Δ. Further ChIP-seq reveals that global effects on Pol II-binding are mutually rescued by prp5-GAR and spt8Δ. Inhibited splicing caused by prp5-GAR is also restored by spt8Δ. In vitro assays indicate that Prp5p directly interacts with Spt8p, but not Spt3p. We demonstrate that Prp5p's splicing proofreading is modulated by Spt8p and Spt3p. Therefore, this study reveals that interactions between the TBP-binding module of SAGA and the spliceosomal ATPase Prp5p mediate a balance between transcription initiation/elongation and pre-spliceosome assembly.